Analysis of interatomic Contacts of Structural Units in PDB entry:
6W5R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W5R entry

There is 1 chain in PDB entry 6W5R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 23VAL 1255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6W5R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 63Right-handed alpha
Helix 2
AA2
A
64 67Right-handed 310
Helix 3
AA3
A
76 87Right-handed alpha
Helix 4
AA4
A
87 95Right-handed alpha
Helix 5
AA5
A
97 114Right-handed alpha
Helix 6
AA6
A
116 119Right-handed 310
Helix 7
AA7
A
149 161Right-handed alpha
Helix 8
AA8
A
171 176Right-handed 310
Helix 9
AA9
A
187 195Right-handed alpha
Helix 10
AB1
A
266 294Right-handed alpha
Helix 11
AB2
A
327 349Right-handed alpha
Helix 12
AB3
A
349 366Right-handed alpha
Helix 13
AB4
A
367 371Right-handed 310
Helix 14
AB5
A
376 382Right-handed alpha
Helix 15
AB6
A
386 399Right-handed alpha
Helix 16
AB7
A
436 453Right-handed alpha
Helix 17
AB8
A
463 468Right-handed alpha
Helix 18
AB9
A
483 489Right-handed 310
Helix 19
AC1
A
491 496Right-handed alpha
Helix 20
AC2
A
508 519Right-handed alpha
Helix 21
AC3
A
542 545Right-handed 310
Helix 22
AC4
A
554 558Right-handed 310
Helix 23
AC5
A
574 593Right-handed alpha
Helix 24
AC6
A
607 617Right-handed alpha
Helix 25
AC7
A
620 639Right-handed alpha
Helix 26
AC8
A
653 679Right-handed alpha
Helix 27
AC9
A
685 711Right-handed alpha
Helix 28
AD1
A
719 749Right-handed alpha
Helix 29
AD2
A
754 792Right-handed alpha
Helix 30
AD3
A
817 822Right-handed alpha
Helix 31
AD4
A
824 830Right-handed alpha
Helix 32
AD5
A
834 852Right-handed alpha
Helix 33
AD6
A
853 856Right-handed 310
Helix 34
AD7
A
870 883Right-handed alpha
Helix 35
AD8
A
901 907Right-handed alpha
Helix 36
AD9
A
918 930Right-handed alpha
Helix 37
AE1
A
942 951Right-handed alpha
Helix 38
AE2
A
993 1004Right-handed alpha
Helix 39
AE3
A
1047 1070Right-handed alpha
Helix 40
AE4
A
1084 1089Right-handed alpha
Helix 41
AE5
A
1090 1092Right-handed 310
Helix 42
AE6
A
1093 1117Right-handed alpha
Helix 43
AE7
A
1120 1145Right-handed alpha
Helix 44
AE8
A
1152 1177Right-handed alpha
Helix 45
AE9
A
1182 1202Right-handed alpha
Helix 46
AF1
A
1202 1214Right-handed alpha
Helix 47
AF2
A
1218 1225Right-handed alpha
Helix 48
AF3
A
1225 1252Right-handed alpha
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There are 6 sheets in PDB entry 6W5R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
41 43anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 129first strand
Strand 2
A
138 148anti-parallel
Strand 3
A
206 209parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 548first strand
Strand 2
A
560 562anti-parallel
Strand 3
A
408 411anti-parallel
Strand 4
A
602 603anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 420first strand
Strand 2
A
429 431anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1039 1041first strand
Strand 2
A
888 893anti-parallel
Strand 3
A
1078 1081anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1023 1026first strand
Strand 2
A
1032 1036anti-parallel
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