Analysis of interatomic Contacts of Structural Units in PDB entry:
6W6A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W6A entry

There are 2 chains in PDB entry 6W6A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1LEU 247
B
 HIS -4LEU 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 6W6A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 19Right-handed alpha
Helix 2
AA2
A
24 35Right-handed alpha
Helix 3
AA3
A
52 66Right-handed alpha
Helix 4
AA4
A
86 95Right-handed alpha
Helix 5
AA5
A
116 133Right-handed alpha
Helix 6
AA6
A
150 156Right-handed alpha
Helix 7
AA7
A
164 173Right-handed alpha
Helix 8
AA8
A
176 192Right-handed alpha
Helix 9
AA9
A
207 215Right-handed alpha
Helix 10
AB1
A
224 235Right-handed alpha
Helix 11
AB2
A
235 247Right-handed alpha
Helix 12
AB3
B
8 19Right-handed alpha
Helix 13
AB4
B
24 35Right-handed alpha
Helix 14
AB5
B
52 66Right-handed alpha
Helix 15
AB6
B
86 95Right-handed alpha
Helix 16
AB7
B
116 134Right-handed alpha
Helix 17
AB8
B
150 156Right-handed alpha
Helix 18
AB9
B
164 173Right-handed alpha
Helix 19
AC1
B
176 192Right-handed alpha
Helix 20
AC2
B
207 215Right-handed alpha
Helix 21
AC3
B
224 235Right-handed alpha
Helix 22
AC4
B
235 245Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6W6A. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
39 42parallel
Strand 3
A
69 74parallel
Strand 4
A
98 101parallel
Strand 5
A
137 142parallel
Strand 6
A
159 163parallel
Strand 7
A
196 200parallel
Strand 8
A
218 223parallel
Strand 9
A
3 7parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
39 42parallel
Strand 3
B
69 74parallel
Strand 4
B
98 101parallel
Strand 5
B
137 142parallel
Strand 6
B
159 163parallel
Strand 7
B
196 200parallel
Strand 8
B
218 223parallel
Strand 9
B
3 7parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il