Analysis of interatomic Contacts of Structural Units in PDB entry:
6W6J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6W6J entry

There are 7 chains in PDB entry 6W6J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 159	LEU 845
B	GLN 159	LEU 845
C	GLN 159	LEU 845
D	PHE 4	LEU 845
E	GLN 159	LEU 845
F	GLN 159	LEU 845
N	UNK 1	UNK 26

There are193 helices in PDB entry 6W6J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	159	164	Right-handed alpha
Helix 2	AA2	A	168	174	Right-handed alpha
Helix 3	AA3	A	183	195	Right-handed alpha
Helix 4	AA4	A	212	226	Right-handed alpha
Helix 5	AA5	A	229	233	Right-handed 310
Helix 6	AA6	A	241	246	Right-handed alpha
Helix 7	AA7	A	254	269	Right-handed alpha
Helix 8	AA8	A	280	284	Right-handed 310
Helix 9	AA9	A	300	306	Right-handed alpha
Helix 10	AB1	A	317	324	Right-handed alpha
Helix 11	AB2	A	327	332	Right-handed alpha
Helix 12	AB3	A	343	362	Right-handed alpha
Helix 13	AB4	A	367	377	Right-handed alpha
Helix 14	AB5	A	386	391	Right-handed alpha
Helix 15	AB6	A	391	407	Right-handed alpha
Helix 16	AB7	A	415	431	Right-handed alpha
Helix 17	AB8	A	438	469	Right-handed alpha
Helix 18	AB9	A	535	545	Right-handed alpha
Helix 19	AC1	A	556	561	Right-handed alpha
Helix 20	AC2	A	563	569	Right-handed alpha
Helix 21	AC3	A	575	591	Right-handed alpha
Helix 22	AC4	A	614	626	Right-handed alpha
Helix 23	AC5	A	641	648	Right-handed 310
Helix 24	AC6	A	664	668	Right-handed 310
Helix 25	AC7	A	680	684	Right-handed 310
Helix 26	AC8	A	687	690	Right-handed 310
Helix 27	AC9	A	691	696	Right-handed alpha
Helix 28	AD1	A	728	739	Right-handed alpha
Helix 29	AD2	A	740	745	Right-handed alpha
Helix 30	AD3	A	757	760	Right-handed 310
Helix 31	AD4	A	761	776	Right-handed alpha
Helix 32	AD5	A	786	797	Right-handed alpha
Helix 33	AD6	A	804	824	Right-handed alpha
Helix 34	AD7	B	168	174	Right-handed alpha
Helix 35	AD8	B	183	195	Right-handed alpha
Helix 36	AD9	B	212	226	Right-handed alpha
Helix 37	AE1	B	242	246	Right-handed 310
Helix 38	AE2	B	253	269	Right-handed alpha
Helix 39	AE3	B	280	284	Right-handed 310
Helix 40	AE4	B	299	307	Right-handed alpha
Helix 41	AE5	B	316	324	Right-handed alpha
Helix 42	AE6	B	330	334	Right-handed 310
Helix 43	AE7	B	343	362	Right-handed alpha
Helix 44	AE8	B	367	377	Right-handed alpha
Helix 45	AE9	B	378	380	Right-handed 310
Helix 46	AF1	B	388	408	Right-handed alpha
Helix 47	AF2	B	414	431	Right-handed alpha
Helix 48	AF3	B	438	469	Right-handed alpha
Helix 49	AF4	B	536	545	Right-handed alpha
Helix 50	AF5	B	556	563	Right-handed alpha
Helix 51	AF6	B	575	583	Right-handed alpha
Helix 52	AF7	B	583	591	Right-handed alpha
Helix 53	AF8	B	615	626	Right-handed alpha
Helix 54	AF9	B	641	648	Right-handed 310
Helix 55	AG1	B	664	669	Right-handed alpha
Helix 56	AG2	B	680	684	Right-handed 310
Helix 57	AG3	B	687	693	Right-handed alpha
Helix 58	AG4	B	731	736	Right-handed alpha
Helix 59	AG5	B	740	745	Right-handed alpha
Helix 60	AG6	B	758	760	Right-handed 310
Helix 61	AG7	B	761	777	Right-handed alpha
Helix 62	AG8	B	778	780	Right-handed 310
Helix 63	AG9	B	786	796	Right-handed alpha
Helix 64	AH1	B	805	824	Right-handed alpha
Helix 65	AH2	C	160	165	Right-handed alpha
Helix 66	AH3	C	168	174	Right-handed alpha
Helix 67	AH4	C	183	195	Right-handed alpha
Helix 68	AH5	C	212	226	Right-handed alpha
Helix 69	AH6	C	229	233	Right-handed 310
Helix 70	AH7	C	253	269	Right-handed alpha
Helix 71	AH8	C	280	283	Right-handed 310
Helix 72	AH9	C	300	306	Right-handed alpha
Helix 73	AI1	C	327	332	Right-handed alpha
Helix 74	AI2	C	343	355	Right-handed alpha
Helix 75	AI3	C	356	362	Right-handed alpha
Helix 76	AI4	C	367	381	Right-handed alpha
Helix 77	AI5	C	386	391	Right-handed alpha
Helix 78	AI6	C	391	407	Right-handed alpha
Helix 79	AI7	C	413	431	Right-handed alpha
Helix 80	AI8	C	436	469	Right-handed alpha
Helix 81	AI9	C	536	545	Right-handed alpha
Helix 82	AJ1	C	557	569	Right-handed alpha
Helix 83	AJ2	C	575	591	Right-handed alpha
Helix 84	AJ3	C	612	626	Right-handed alpha
Helix 85	AJ4	C	627	631	Right-handed 310
Helix 86	AJ5	C	641	649	Right-handed 310
Helix 87	AJ6	C	664	669	Right-handed alpha
Helix 88	AJ7	C	680	684	Right-handed 310
Helix 89	AJ8	C	692	698	Right-handed alpha
Helix 90	AJ9	C	730	739	Right-handed alpha
Helix 91	AK1	C	740	745	Right-handed alpha
Helix 92	AK2	C	757	777	Right-handed alpha
Helix 93	AK3	C	778	780	Right-handed 310
Helix 94	AK4	C	786	796	Right-handed alpha
Helix 95	AK5	C	805	824	Right-handed alpha
Helix 96	AK6	D	7	23	Right-handed alpha
Helix 97	AK7	D	30	40	Right-handed alpha
Helix 98	AK8	D	46	53	Right-handed alpha
Helix 99	AK9	D	64	68	Right-handed 310
Helix 100	AL1	D	84	98	Right-handed alpha
Helix 101	AL2	D	107	119	Right-handed alpha
Helix 102	AL3	D	119	130	Right-handed alpha
Helix 103	AL4	D	132	137	Right-handed alpha
Helix 104	AL5	D	140	145	Right-handed alpha
Helix 105	AL6	D	159	164	Right-handed alpha
Helix 106	AL7	D	168	174	Right-handed alpha
Helix 107	AL8	D	183	195	Right-handed alpha
Helix 108	AL9	D	212	225	Right-handed alpha
Helix 109	AM1	D	229	233	Right-handed 310
Helix 110	AM2	D	254	268	Right-handed alpha
Helix 111	AM3	D	280	284	Right-handed 310
Helix 112	AM4	D	300	305	Right-handed alpha
Helix 113	AM5	D	317	323	Right-handed alpha
Helix 114	AM6	D	324	326	Right-handed 310
Helix 115	AM7	D	327	332	Right-handed alpha
Helix 116	AM8	D	343	362	Right-handed alpha
Helix 117	AM9	D	367	381	Right-handed alpha
Helix 118	AN1	D	386	407	Right-handed alpha
Helix 119	AN2	D	534	545	Right-handed alpha
Helix 120	AN3	D	557	563	Right-handed alpha
Helix 121	AN4	D	563	568	Right-handed alpha
Helix 122	AN5	D	569	571	Right-handed 310
Helix 123	AN6	D	575	592	Right-handed alpha
Helix 124	AN7	D	612	626	Right-handed alpha
Helix 125	AN8	D	637	639	Right-handed 310
Helix 126	AN9	D	642	648	Right-handed 310
Helix 127	AO1	D	662	670	Right-handed alpha
Helix 128	AO2	D	688	696	Right-handed alpha
Helix 129	AO3	D	729	739	Right-handed alpha
Helix 130	AO4	D	740	745	Right-handed alpha
Helix 131	AO5	D	757	760	Right-handed 310
Helix 132	AO6	D	761	776	Right-handed alpha
Helix 133	AO7	D	786	796	Right-handed alpha
Helix 134	AO8	D	807	815	Right-handed alpha
Helix 135	AO9	D	815	821	Right-handed alpha
Helix 136	AP1	E	170	174	Right-handed 310
Helix 137	AP2	E	184	194	Right-handed alpha
Helix 138	AP3	E	211	226	Right-handed alpha
Helix 139	AP4	E	241	245	Right-handed 310
Helix 140	AP5	E	254	269	Right-handed alpha
Helix 141	AP6	E	279	283	Right-handed 310
Helix 142	AP7	E	300	305	Right-handed alpha
Helix 143	AP8	E	316	324	Right-handed alpha
Helix 144	AP9	E	330	334	Right-handed 310
Helix 145	AQ1	E	343	354	Right-handed alpha
Helix 146	AQ2	E	355	362	Right-handed alpha
Helix 147	AQ3	E	367	382	Right-handed alpha
Helix 148	AQ4	E	386	405	Right-handed alpha
Helix 149	AQ5	E	535	547	Right-handed alpha
Helix 150	AQ6	E	557	562	Right-handed alpha
Helix 151	AQ7	E	575	590	Right-handed alpha
Helix 152	AQ8	E	612	625	Right-handed alpha
Helix 153	AQ9	E	642	649	Right-handed 310
Helix 154	AR1	E	680	684	Right-handed 310
Helix 155	AR2	E	687	698	Right-handed alpha
Helix 156	AR3	E	729	739	Right-handed alpha
Helix 157	AR4	E	761	773	Right-handed alpha
Helix 158	AR5	E	774	778	Right-handed 310
Helix 159	AR6	E	786	793	Right-handed alpha
Helix 160	AR7	E	793	798	Right-handed alpha
Helix 161	AR8	E	808	820	Right-handed alpha
Helix 162	AR9	E	821	826	Right-handed alpha
Helix 163	AS1	F	169	175	Right-handed alpha
Helix 164	AS2	F	183	195	Right-handed alpha
Helix 165	AS3	F	211	226	Right-handed alpha
Helix 166	AS4	F	257	269	Right-handed alpha
Helix 167	AS5	F	280	283	Right-handed 310
Helix 168	AS6	F	301	306	Right-handed alpha
Helix 169	AS7	F	317	325	Right-handed alpha
Helix 170	AS8	F	330	334	Right-handed 310
Helix 171	AS9	F	343	359	Right-handed alpha
Helix 172	AT1	F	367	375	Right-handed alpha
Helix 173	AT2	F	377	382	Right-handed alpha
Helix 174	AT3	F	386	407	Right-handed alpha
Helix 175	AT4	F	415	428	Right-handed alpha
Helix 176	AT5	F	438	469	Right-handed alpha
Helix 177	AT6	F	535	544	Right-handed alpha
Helix 178	AT7	F	557	563	Right-handed alpha
Helix 179	AT8	F	563	568	Right-handed alpha
Helix 180	AT9	F	569	571	Right-handed 310
Helix 181	AU1	F	575	584	Right-handed alpha
Helix 182	AU2	F	586	591	Right-handed alpha
Helix 183	AU3	F	614	626	Right-handed alpha
Helix 184	AU4	F	627	631	Right-handed 310
Helix 185	AU5	F	641	648	Right-handed 310
Helix 186	AU6	F	664	669	Right-handed alpha
Helix 187	AU7	F	680	684	Right-handed 310
Helix 188	AU8	F	688	699	Right-handed alpha
Helix 189	AU9	F	728	739	Right-handed alpha
Helix 190	AV1	F	757	760	Right-handed 310
Helix 191	AV2	F	761	776	Right-handed alpha
Helix 192	AV3	F	786	797	Right-handed alpha
Helix 193	AV4	F	804	824	Right-handed alpha

There are 28 sheets in PDB entry 6W6J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	167	first strand
Strand 2	A	237	239	anti-parallel
Strand 3	A	274	278	parallel
Strand 4	A	312	316	parallel
Strand 5	A	202	206	parallel
Strand 6	A	335	338	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	366	first strand
Strand 2	A	532	533	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	632	635	first strand
Strand 2	A	675	679	parallel
Strand 3	A	715	718	parallel
Strand 4	A	602	606	parallel
Strand 5	A	751	752	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	700	702	first strand
Strand 2	A	708	710	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	784	785	first strand
Strand 2	A	835	836	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	165	167	first strand
Strand 2	B	236	240	anti-parallel
Strand 3	B	273	278	parallel
Strand 4	B	312	315	parallel
Strand 5	B	202	205	parallel
Strand 6	B	335	338	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	632	635	first strand
Strand 2	B	676	679	parallel
Strand 3	B	715	718	parallel
Strand 4	B	601	606	parallel
Strand 5	B	751	752	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	700	702	first strand
Strand 2	B	708	710	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	782	785	first strand
Strand 2	B	833	838	parallel
Strand 3	B	843	844	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	167	first strand
Strand 2	C	237	239	anti-parallel
Strand 3	C	274	278	parallel
Strand 4	C	312	315	parallel
Strand 5	C	202	205	parallel
Strand 6	C	335	338	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	365	366	first strand
Strand 2	C	532	533	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	602	603	first strand
Strand 2	C	715	718	parallel
Strand 3	C	675	679	parallel
Strand 4	C	632	635	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	700	702	first strand
Strand 2	C	708	710	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	783	785	first strand
Strand 2	C	834	838	parallel
Strand 3	C	843	844	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	29	first strand
Strand 2	D	82	83	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	165	167	first strand
Strand 2	D	238	240	anti-parallel
Strand 3	D	275	278	parallel
Strand 4	D	312	316	parallel
Strand 5	D	202	206	parallel
Strand 6	D	335	338	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	365	366	first strand
Strand 2	D	532	533	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	632	635	first strand
Strand 2	D	675	679	parallel
Strand 3	D	715	720	parallel
Strand 4	D	602	606	parallel
Strand 5	D	750	752	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	700	702	first strand
Strand 2	D	708	710	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	782	784	first strand
Strand 2	D	833	835	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	313	315	first strand
Strand 2	E	203	205	parallel
Strand 3	E	336	338	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	237	240	first strand
Strand 2	E	274	277	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	602	604	first strand
Strand 2	E	715	718	parallel
Strand 3	E	675	677	parallel
Strand 4	E	631	633	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	701	702	first strand
Strand 2	E	708	709	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	276	278	first strand
Strand 2	F	312	316	parallel
Strand 3	F	203	206	parallel
Strand 4	F	336	338	parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	632	635	first strand
Strand 2	F	675	679	parallel
Strand 3	F	715	720	parallel
Strand 4	F	601	606	parallel
Strand 5	F	751	752	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	700	702	first strand
Strand 2	F	708	710	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	783	784	first strand
Strand 2	F	834	835	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6W6J

Analysis of interatomic Contacts of Structural Units in PDB entry:
6W6J