Analysis of interatomic Contacts of Structural Units in PDB entry:
6W6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6W6O entry

There are 8 chains in PDB entry 6W6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 15LYS 240
C
 GLU 1ILE 35
D
 LYS 15LYS 240
E
 GLU 1ILE 35
F
 LYS 15LYS 240
G
 GLU 1ILE 35
H
 LYS 15LYS 240
I
 GLU 1ILE 35
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6W6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 43Right-handed alpha
Helix 2
AA2
A
45 78Right-handed alpha
Helix 3
AA3
A
87 106Right-handed alpha
Helix 4
AA4
A
115 122Right-handed alpha
Helix 5
AA5
A
124 130Right-handed alpha
Helix 6
AA6
A
130 148Right-handed alpha
Helix 7
AA7
A
148 170Right-handed alpha
Helix 8
AA8
A
181 192Right-handed alpha
Helix 9
AA9
A
208 210Right-handed 310
Helix 10
AB1
A
211 236Right-handed alpha
Helix 11
AB2
D
22 43Right-handed alpha
Helix 12
AB3
D
45 78Right-handed alpha
Helix 13
AB4
D
87 106Right-handed alpha
Helix 14
AB5
D
115 122Right-handed alpha
Helix 15
AB6
D
124 130Right-handed alpha
Helix 16
AB7
D
130 148Right-handed alpha
Helix 17
AB8
D
148 170Right-handed alpha
Helix 18
AB9
D
181 192Right-handed alpha
Helix 19
AC1
D
208 210Right-handed 310
Helix 20
AC2
D
211 236Right-handed alpha
Helix 21
AC3
F
22 43Right-handed alpha
Helix 22
AC4
F
45 78Right-handed alpha
Helix 23
AC5
F
87 106Right-handed alpha
Helix 24
AC6
F
115 122Right-handed alpha
Helix 25
AC7
F
124 130Right-handed alpha
Helix 26
AC8
F
130 148Right-handed alpha
Helix 27
AC9
F
148 170Right-handed alpha
Helix 28
AD1
F
181 192Right-handed alpha
Helix 29
AD2
F
208 210Right-handed 310
Helix 30
AD3
F
211 236Right-handed alpha
Helix 31
AD4
H
22 43Right-handed alpha
Helix 32
AD5
H
45 78Right-handed alpha
Helix 33
AD6
H
87 106Right-handed alpha
Helix 34
AD7
H
115 122Right-handed alpha
Helix 35
AD8
H
124 130Right-handed alpha
Helix 36
AD9
H
130 148Right-handed alpha
Helix 37
AE1
H
148 170Right-handed alpha
Helix 38
AE2
H
181 192Right-handed alpha
Helix 39
AE3
H
208 210Right-handed 310
Helix 40
AE4
H
211 236Right-handed alpha
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There are 4 sheets in PDB entry 6W6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 24first strand
Strand 2
C
31 33anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
22 24first strand
Strand 2
E
31 33anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
22 24first strand
Strand 2
G
31 33anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
22 24first strand
Strand 2
I
31 33anti-parallel
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