Analysis of interatomic Contacts of Structural Units in PDB entry:
6WA9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WA9 entry

There are 4 chains in PDB entry 6WA9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 364	ARG 700
B	ASN 362	ILE 709
C	ASN 362	GLN 708
D	PRO 363	GLU 581

There are171 helices in PDB entry 6WA9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	377	384	Right-handed alpha
Helix 2	AA2	A	397	410	Right-handed alpha
Helix 3	AA3	A	484	491	Right-handed alpha
Helix 4	AA4	A	497	513	Right-handed alpha
Helix 5	AA5	A	514	518	Right-handed 310
Helix 6	AA6	A	519	532	Right-handed alpha
Helix 7	AA7	A	534	545	Right-handed alpha
Helix 8	AA8	A	546	559	Right-handed alpha
Helix 9	AA9	A	566	578	Right-handed alpha
Helix 10	AB1	A	583	595	Right-handed alpha
Helix 11	AB2	A	595	605	Right-handed alpha
Helix 12	AB3	A	616	621	Right-handed alpha
Helix 13	AB4	A	641	654	Right-handed alpha
Helix 14	AB5	A	672	681	Right-handed alpha
Helix 15	AB6	A	693	695	Right-handed 310
Helix 16	AB7	B	377	384	Right-handed alpha
Helix 17	AB8	B	397	410	Right-handed alpha
Helix 18	AB9	B	455	460	Right-handed alpha
Helix 19	AC1	B	484	491	Right-handed alpha
Helix 20	AC2	B	497	513	Right-handed alpha
Helix 21	AC3	B	519	532	Right-handed alpha
Helix 22	AC4	B	534	545	Right-handed alpha
Helix 23	AC5	B	546	559	Right-handed alpha
Helix 24	AC6	B	566	578	Right-handed alpha
Helix 25	AC7	B	583	595	Right-handed alpha
Helix 26	AC8	B	595	605	Right-handed alpha
Helix 27	AC9	B	616	624	Right-handed alpha
Helix 28	AD1	B	625	627	Right-handed 310
Helix 29	AD2	B	641	654	Right-handed alpha
Helix 30	AD3	B	669	671	Right-handed 310
Helix 31	AD4	B	672	681	Right-handed alpha
Helix 32	AD5	B	693	695	Right-handed 310
Helix 33	AD6	C	377	384	Right-handed alpha
Helix 34	AD7	C	397	410	Right-handed alpha
Helix 35	AD8	C	457	462	Right-handed alpha
Helix 36	AD9	C	484	491	Right-handed alpha
Helix 37	AE1	C	497	513	Right-handed alpha
Helix 38	AE2	C	514	518	Right-handed 310
Helix 39	AE3	C	519	534	Right-handed alpha
Helix 40	AE4	C	534	545	Right-handed alpha
Helix 41	AE5	C	546	560	Right-handed alpha
Helix 42	AE6	C	566	578	Right-handed alpha
Helix 43	AE7	C	583	595	Right-handed alpha
Helix 44	AE8	C	595	605	Right-handed alpha
Helix 45	AE9	C	616	623	Right-handed alpha
Helix 46	AF1	C	624	627	Right-handed 310
Helix 47	AF2	C	641	654	Right-handed alpha
Helix 48	AF3	C	669	671	Right-handed 310
Helix 49	AF4	C	672	681	Right-handed alpha
Helix 50	AF5	C	693	695	Right-handed 310
Helix 51	AF6	D	377	384	Right-handed alpha
Helix 52	AF7	D	397	410	Right-handed alpha
Helix 53	AF8	D	457	462	Right-handed alpha
Helix 54	AF9	D	484	491	Right-handed alpha
Helix 55	AG1	D	497	513	Right-handed alpha
Helix 56	AG2	D	514	518	Right-handed 310
Helix 57	AG3	D	519	532	Right-handed alpha
Helix 58	AG4	D	534	545	Right-handed alpha
Helix 59	AG5	D	546	559	Right-handed alpha
Helix 60	AG6	D	566	578	Right-handed alpha
Helix 61	AG7	D	583	595	Right-handed alpha
Helix 62	AG8	D	595	605	Right-handed alpha
Helix 63	AG9	D	616	623	Right-handed alpha
Helix 64	AH1	D	624	627	Right-handed 310
Helix 65	AH2	D	641	652	Right-handed alpha
Helix 66	AH3	D	669	671	Right-handed 310
Helix 67	AH4	D	672	681	Right-handed alpha
Helix 68	AH5	D	693	695	Right-handed 310
Helix 69	AH6	E	377	384	Right-handed alpha
Helix 70	AH7	E	397	410	Right-handed alpha
Helix 71	AH8	E	455	460	Right-handed alpha
Helix 72	AH9	E	484	491	Right-handed alpha
Helix 73	AI1	E	497	513	Right-handed alpha
Helix 74	AI2	E	519	532	Right-handed alpha
Helix 75	AI3	E	534	545	Right-handed alpha
Helix 76	AI4	E	546	559	Right-handed alpha
Helix 77	AI5	E	566	578	Right-handed alpha
Helix 78	AI6	E	583	595	Right-handed alpha
Helix 79	AI7	E	595	605	Right-handed alpha
Helix 80	AI8	E	616	624	Right-handed alpha
Helix 81	AI9	E	625	627	Right-handed 310
Helix 82	AJ1	E	641	652	Right-handed alpha
Helix 83	AJ2	E	669	671	Right-handed 310
Helix 84	AJ3	E	672	681	Right-handed alpha
Helix 85	AJ4	E	693	695	Right-handed 310
Helix 86	AJ5	F	377	384	Right-handed alpha
Helix 87	AJ6	F	397	410	Right-handed alpha
Helix 88	AJ7	F	455	461	Right-handed alpha
Helix 89	AJ8	F	484	492	Right-handed alpha
Helix 90	AJ9	F	497	513	Right-handed alpha
Helix 91	AK1	F	514	518	Right-handed 310
Helix 92	AK2	F	519	532	Right-handed alpha
Helix 93	AK3	F	534	545	Right-handed alpha
Helix 94	AK4	F	546	560	Right-handed alpha
Helix 95	AK5	F	566	578	Right-handed alpha
Helix 96	AK6	F	583	595	Right-handed alpha
Helix 97	AK7	F	595	605	Right-handed alpha
Helix 98	AK8	F	616	624	Right-handed alpha
Helix 99	AK9	F	625	627	Right-handed 310
Helix 100	AL1	F	641	652	Right-handed alpha
Helix 101	AL2	F	669	671	Right-handed 310
Helix 102	AL3	F	672	681	Right-handed alpha
Helix 103	AL4	F	693	695	Right-handed 310
Helix 104	AL5	G	377	384	Right-handed alpha
Helix 105	AL6	G	397	410	Right-handed alpha
Helix 106	AL7	G	455	462	Right-handed alpha
Helix 107	AL8	G	484	491	Right-handed alpha
Helix 108	AL9	G	497	513	Right-handed alpha
Helix 109	AM1	G	519	532	Right-handed alpha
Helix 110	AM2	G	534	545	Right-handed alpha
Helix 111	AM3	G	546	560	Right-handed alpha
Helix 112	AM4	G	566	578	Right-handed alpha
Helix 113	AM5	G	583	595	Right-handed alpha
Helix 114	AM6	G	595	605	Right-handed alpha
Helix 115	AM7	G	616	624	Right-handed alpha
Helix 116	AM8	G	625	627	Right-handed 310
Helix 117	AM9	G	641	652	Right-handed alpha
Helix 118	AN1	G	669	671	Right-handed 310
Helix 119	AN2	G	672	681	Right-handed alpha
Helix 120	AN3	G	693	695	Right-handed 310
Helix 121	AN4	H	377	384	Right-handed alpha
Helix 122	AN5	H	397	410	Right-handed alpha
Helix 123	AN6	H	455	462	Right-handed alpha
Helix 124	AN7	H	484	491	Right-handed alpha
Helix 125	AN8	H	497	513	Right-handed alpha
Helix 126	AN9	H	519	531	Right-handed alpha
Helix 127	AO1	H	534	545	Right-handed alpha
Helix 128	AO2	H	546	559	Right-handed alpha
Helix 129	AO3	H	566	578	Right-handed alpha
Helix 130	AO4	H	583	595	Right-handed alpha
Helix 131	AO5	H	595	605	Right-handed alpha
Helix 132	AO6	H	616	624	Right-handed alpha
Helix 133	AO7	H	641	652	Right-handed alpha
Helix 134	AO8	H	669	671	Right-handed 310
Helix 135	AO9	H	672	681	Right-handed alpha
Helix 136	AP1	H	693	695	Right-handed 310
Helix 137	AP2	I	377	384	Right-handed alpha
Helix 138	AP3	I	397	410	Right-handed alpha
Helix 139	AP4	I	455	462	Right-handed alpha
Helix 140	AP5	I	484	491	Right-handed alpha
Helix 141	AP6	I	497	513	Right-handed alpha
Helix 142	AP7	I	514	518	Right-handed 310
Helix 143	AP8	I	519	532	Right-handed alpha
Helix 144	AP9	I	534	545	Right-handed alpha
Helix 145	AQ1	I	546	559	Right-handed alpha
Helix 146	AQ2	I	566	578	Right-handed alpha
Helix 147	AQ3	I	583	595	Right-handed alpha
Helix 148	AQ4	I	595	605	Right-handed alpha
Helix 149	AQ5	I	616	624	Right-handed alpha
Helix 150	AQ6	I	625	627	Right-handed 310
Helix 151	AQ7	I	641	652	Right-handed alpha
Helix 152	AQ8	I	672	681	Right-handed alpha
Helix 153	AQ9	I	693	695	Right-handed 310
Helix 154	AR1	L	24	66	Right-handed alpha
Helix 155	AR2	L	68	105	Right-handed alpha
Helix 156	AR3	M	37	66	Right-handed alpha
Helix 157	AR4	M	68	100	Right-handed alpha
Helix 158	AR5	N	26	66	Right-handed alpha
Helix 159	AR6	N	68	110	Right-handed alpha
Helix 160	AR7	O	34	66	Right-handed alpha
Helix 161	AR8	O	68	106	Right-handed alpha
Helix 162	AR9	P	37	66	Right-handed alpha
Helix 163	AS1	P	68	100	Right-handed alpha
Helix 164	AS2	Q	35	66	Right-handed alpha
Helix 165	AS3	Q	68	104	Right-handed alpha
Helix 166	AS4	R	43	66	Right-handed alpha
Helix 167	AS5	R	68	100	Right-handed alpha
Helix 168	AS6	S	46	66	Right-handed alpha
Helix 169	AS7	S	68	84	Right-handed alpha
Helix 170	AS8	T	29	66	Right-handed alpha
Helix 171	AS9	T	68	102	Right-handed alpha

There are 28 sheets in PDB entry 6WA9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	420	first strand
Strand 2	A	372	376	parallel
Strand 3	A	430	435	anti-parallel
Strand 4	A	438	444	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	466	467	first strand
Strand 2	A	478	481	anti-parallel
Strand 3	A	449	452	anti-parallel
Strand 4	A	495	496	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	665	668	first strand
Strand 2	A	688	691	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	420	first strand
Strand 2	B	372	376	parallel
Strand 3	B	430	435	anti-parallel
Strand 4	B	438	444	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	449	451	first strand
Strand 2	B	478	481	anti-parallel
Strand 3	B	467	468	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	609	612	first strand
Strand 2	B	700	703	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	665	668	first strand
Strand 2	B	688	691	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	417	420	first strand
Strand 2	C	372	376	parallel
Strand 3	C	430	435	anti-parallel
Strand 4	C	438	444	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	449	451	first strand
Strand 2	C	479	481	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	688	691	first strand
Strand 2	C	665	668	parallel
Strand 3	C	609	614	parallel
Strand 4	C	700	706	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	420	first strand
Strand 2	D	372	376	parallel
Strand 3	D	430	435	anti-parallel
Strand 4	D	438	444	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	449	451	first strand
Strand 2	D	479	481	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	666	668	first strand
Strand 2	D	689	691	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	418	420	first strand
Strand 2	E	372	376	parallel
Strand 3	E	430	435	anti-parallel
Strand 4	E	438	444	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	449	451	first strand
Strand 2	E	478	481	anti-parallel
Strand 3	E	467	468	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	688	691	first strand
Strand 2	E	665	668	parallel
Strand 3	E	609	613	parallel
Strand 4	E	700	703	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	418	420	first strand
Strand 2	F	372	376	parallel
Strand 3	F	430	435	anti-parallel
Strand 4	F	438	444	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	449	451	first strand
Strand 2	F	479	481	anti-parallel
Strand 3	F	466	467	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	689	691	first strand
Strand 2	F	665	668	parallel
Strand 3	F	609	614	parallel
Strand 4	F	700	706	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	418	420	first strand
Strand 2	G	372	376	parallel
Strand 3	G	430	435	anti-parallel
Strand 4	G	438	444	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	449	451	first strand
Strand 2	G	479	481	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	688	691	first strand
Strand 2	G	665	668	parallel
Strand 3	G	609	614	parallel
Strand 4	G	700	706	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	418	420	first strand
Strand 2	H	372	376	parallel
Strand 3	H	430	435	anti-parallel
Strand 4	H	438	444	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	449	451	first strand
Strand 2	H	479	481	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	689	691	first strand
Strand 2	H	665	668	parallel
Strand 3	H	609	614	parallel
Strand 4	H	700	703	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	418	420	first strand
Strand 2	I	372	376	parallel
Strand 3	I	430	435	anti-parallel
Strand 4	I	438	444	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	449	451	first strand
Strand 2	I	479	481	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	688	691	first strand
Strand 2	I	665	668	parallel
Strand 3	I	609	614	parallel
Strand 4	I	700	706	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WA9

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WA9