Analysis of interatomic Contacts of Structural Units in PDB entry:
6WAV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WAV entry

There are 12 chains in PDB entry 6WAV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 27GLY 85
B
 GLY 27PRO 84
C
 GLY 27GLU 86
D
 GLY 27GLU 86
E
 ALA 31VAL 35
E
 LYS 37ARG 42
F
 ALA 31VAL 35
F
 LYS 37ARG 42
G
 VAL 35VAL 35
G
 LYS 37ARG 42
H
 VAL 35VAL 35
H
 LYS 37TYR 41
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 6WAV

There are 4 sheets in PDB entry 6WAV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 74first strand
Strand 2
A
60 65anti-parallel
Strand 3
A
46 55anti-parallel
Strand 4
A
36 40anti-parallel
Strand 5
A
78 80anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 74first strand
Strand 2
B
60 65anti-parallel
Strand 3
B
46 55anti-parallel
Strand 4
B
36 40anti-parallel
Strand 5
B
78 80anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 74first strand
Strand 2
C
60 65anti-parallel
Strand 3
C
46 55anti-parallel
Strand 4
C
36 40anti-parallel
Strand 5
C
78 80anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
70 74first strand
Strand 2
D
60 65anti-parallel
Strand 3
D
46 55anti-parallel
Strand 4
D
36 40anti-parallel
Strand 5
D
78 80anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il