Analysis of interatomic Contacts of Structural Units in PDB entry:
6WB4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WB4 entry

There are 2 chains in PDB entry 6WB4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ARG 299
B
 LEU -6ARG 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6WB4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 54Right-handed alpha
Helix 2
AA2
A
67 80Right-handed alpha
Helix 3
AA3
A
121 124Right-handed 310
Helix 4
AA4
A
125 131Right-handed alpha
Helix 5
AA5
A
142 153Right-handed alpha
Helix 6
AA6
A
171 178Right-handed alpha
Helix 7
AA7
A
190 202Right-handed alpha
Helix 8
AA8
A
212 214Right-handed 310
Helix 9
AA9
A
244 261Right-handed alpha
Helix 10
AB1
A
262 279Right-handed alpha
Helix 11
AB2
A
289 299Right-handed alpha
Helix 12
AB3
B
44 54Right-handed alpha
Helix 13
AB4
B
67 81Right-handed alpha
Helix 14
AB5
B
122 131Right-handed alpha
Helix 15
AB6
B
142 153Right-handed alpha
Helix 16
AB7
B
168 170Right-handed 310
Helix 17
AB8
B
171 176Right-handed alpha
Helix 18
AB9
B
190 202Right-handed alpha
Helix 19
AC1
B
212 214Right-handed 310
Helix 20
AC2
B
244 261Right-handed alpha
Helix 21
AC3
B
262 279Right-handed alpha
Helix 22
AC4
B
289 299Right-handed alpha
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There are 4 sheets in PDB entry 6WB4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 88first strand
Strand 2
A
58 64parallel
Strand 3
A
4 9parallel
Strand 4
A
132 137parallel
Strand 5
A
156 160parallel
Strand 6
A
180 184parallel
Strand 7
A
206 210parallel
Strand 8
A
216 220anti-parallel
Strand 9
A
227 229anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
13 19anti-parallel
Strand 3
A
95 100parallel
Strand 4
A
109 111anti-parallel
Strand 5
B
31 32parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
B
106 111parallel
Strand 3
B
95 100anti-parallel
Strand 4
B
14 19parallel
Strand 5
B
37 40anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
-5 -3first strand
Strand 2
B
84 88anti-parallel
Strand 3
B
58 64parallel
Strand 4
B
4 9parallel
Strand 5
B
132 137parallel
Strand 6
B
156 160parallel
Strand 7
B
180 184parallel
Strand 8
B
206 210parallel
Strand 9
B
216 220anti-parallel
Strand 10
B
227 229anti-parallel
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