Analysis of interatomic Contacts of Structural Units in PDB entry:
6WB7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WB7 entry

There are 4 chains in PDB entry 6WB7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 3	ALA 298
B	HIS 4	ARG 296
C	HIS 4	ARG 296
D	HIS 4	PRO 297

There are 48 helices in PDB entry 6WB7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	55	Right-handed alpha
Helix 2	AA2	A	68	82	Right-handed alpha
Helix 3	AA3	A	123	130	Right-handed alpha
Helix 4	AA4	A	144	147	Right-handed 310
Helix 5	AA5	A	148	153	Right-handed alpha
Helix 6	AA6	A	170	172	Right-handed 310
Helix 7	AA7	A	173	178	Right-handed alpha
Helix 8	AA8	A	192	202	Right-handed alpha
Helix 9	AA9	A	214	216	Right-handed 310
Helix 10	AB1	A	245	259	Right-handed alpha
Helix 11	AB2	A	263	279	Right-handed alpha
Helix 12	AB3	A	290	295	Right-handed alpha
Helix 13	AB4	B	43	55	Right-handed alpha
Helix 14	AB5	B	68	82	Right-handed alpha
Helix 15	AB6	B	123	131	Right-handed alpha
Helix 16	AB7	B	144	147	Right-handed 310
Helix 17	AB8	B	148	154	Right-handed alpha
Helix 18	AB9	B	170	172	Right-handed 310
Helix 19	AC1	B	173	178	Right-handed alpha
Helix 20	AC2	B	192	204	Right-handed alpha
Helix 21	AC3	B	214	216	Right-handed 310
Helix 22	AC4	B	245	259	Right-handed alpha
Helix 23	AC5	B	263	279	Right-handed alpha
Helix 24	AC6	B	290	295	Right-handed alpha
Helix 25	AC7	C	43	55	Right-handed alpha
Helix 26	AC8	C	68	81	Right-handed alpha
Helix 27	AC9	C	123	132	Right-handed alpha
Helix 28	AD1	C	144	147	Right-handed 310
Helix 29	AD2	C	148	153	Right-handed alpha
Helix 30	AD3	C	170	172	Right-handed 310
Helix 31	AD4	C	173	178	Right-handed alpha
Helix 32	AD5	C	192	204	Right-handed alpha
Helix 33	AD6	C	214	216	Right-handed 310
Helix 34	AD7	C	245	259	Right-handed alpha
Helix 35	AD8	C	263	280	Right-handed alpha
Helix 36	AD9	C	290	295	Right-handed alpha
Helix 37	AE1	D	43	55	Right-handed alpha
Helix 38	AE2	D	68	82	Right-handed alpha
Helix 39	AE3	D	123	132	Right-handed alpha
Helix 40	AE4	D	144	147	Right-handed 310
Helix 41	AE5	D	148	153	Right-handed alpha
Helix 42	AE6	D	170	172	Right-handed 310
Helix 43	AE7	D	173	178	Right-handed alpha
Helix 44	AE8	D	192	204	Right-handed alpha
Helix 45	AE9	D	214	216	Right-handed 310
Helix 46	AF1	D	245	260	Right-handed alpha
Helix 47	AF2	D	263	279	Right-handed alpha
Helix 48	AF3	D	290	295	Right-handed alpha

There are 8 sheets in PDB entry 6WB7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	89	first strand
Strand 2	A	59	65	parallel
Strand 3	A	7	10	parallel
Strand 4	A	136	140	parallel
Strand 5	A	158	162	parallel
Strand 6	A	182	186	parallel
Strand 7	A	208	212	parallel
Strand 8	A	218	222	anti-parallel
Strand 9	A	229	231	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	41	first strand
Strand 2	A	14	20	anti-parallel
Strand 3	A	95	101	parallel
Strand 4	A	107	112	anti-parallel
Strand 5	B	31	34	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	34	first strand
Strand 2	B	107	112	parallel
Strand 3	B	95	101	anti-parallel
Strand 4	B	14	20	parallel
Strand 5	B	40	41	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	89	first strand
Strand 2	B	59	65	parallel
Strand 3	B	7	10	parallel
Strand 4	B	136	140	parallel
Strand 5	B	158	162	parallel
Strand 6	B	182	186	parallel
Strand 7	B	208	212	parallel
Strand 8	B	218	222	anti-parallel
Strand 9	B	229	231	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	89	first strand
Strand 2	C	59	65	parallel
Strand 3	C	7	10	parallel
Strand 4	C	136	140	parallel
Strand 5	C	158	162	parallel
Strand 6	C	182	186	parallel
Strand 7	C	208	212	parallel
Strand 8	C	218	222	anti-parallel
Strand 9	C	229	231	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	41	first strand
Strand 2	C	14	20	anti-parallel
Strand 3	C	95	101	parallel
Strand 4	C	107	112	anti-parallel
Strand 5	D	31	34	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	34	first strand
Strand 2	D	107	112	parallel
Strand 3	D	95	101	anti-parallel
Strand 4	D	14	20	parallel
Strand 5	D	40	41	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	89	first strand
Strand 2	D	59	65	parallel
Strand 3	D	7	10	parallel
Strand 4	D	136	140	parallel
Strand 5	D	158	162	parallel
Strand 6	D	182	186	parallel
Strand 7	D	208	212	parallel
Strand 8	D	218	222	anti-parallel
Strand 9	D	229	231	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WB7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WB7