Analysis of interatomic Contacts of Structural Units in PDB entry:
6WBX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WBX entry

There is 1 chain in PDB entry 6WBX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 5VAL 1388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6WBX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 13Right-handed 310
Helix 2
AA2
A
14 27Right-handed alpha
Helix 3
AA3
A
40 45Right-handed alpha
Helix 4
AA4
A
45 53Right-handed alpha
Helix 5
AA5
A
77 82Right-handed alpha
Helix 6
AA6
A
82 87Right-handed alpha
Helix 7
AA7
A
90 118Right-handed alpha
Helix 8
AA8
A
121 134Right-handed alpha
Helix 9
AA9
A
148 154Right-handed alpha
Helix 10
AB1
A
154 165Right-handed alpha
Helix 11
AB2
A
173 185Right-handed alpha
Helix 12
AB3
A
190 198Right-handed alpha
Helix 13
AB4
A
198 207Right-handed alpha
Helix 14
AB5
A
211 229Right-handed alpha
Helix 15
AB6
A
233 243Right-handed alpha
Helix 16
AB7
A
291 309Right-handed alpha
Helix 17
AB8
A
314 331Right-handed alpha
Helix 18
AB9
A
342 347Right-handed alpha
Helix 19
AC1
A
348 350Right-handed 310
Helix 20
AC2
A
363 381Right-handed alpha
Helix 21
AC3
A
403 405Right-handed 310
Helix 22
AC4
A
406 419Right-handed alpha
Helix 23
AC5
A
443 448Right-handed alpha
Helix 24
AC6
A
475 481Right-handed alpha
Helix 25
AC7
A
495 500Right-handed alpha
Helix 26
AC8
A
502 512Right-handed alpha
Helix 27
AC9
A
545 554Right-handed alpha
Helix 28
AD1
A
581 583Right-handed 310
Helix 29
AD2
A
620 629Right-handed alpha
Helix 30
AD3
A
728 732Right-handed 310
Helix 31
AD4
A
934 939Right-handed alpha
Helix 32
AD5
A
959 964Right-handed 310
Helix 33
AD6
A
1094 1097Right-handed 310
Helix 34
AD7
A
1103 1107Right-handed 310
Helix 35
AD8
A
1125 1130Right-handed alpha
Helix 36
AD9
A
1259 1264Right-handed alpha
Helix 37
AE1
A
1268 1276Right-handed alpha
Helix 38
AE2
A
1300 1308Right-handed alpha
Helix 39
AE3
A
1338 1353Right-handed alpha
Helix 40
AE4
A
1372 1388Right-handed alpha
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There are 16 sheets in PDB entry 6WBX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
65 66anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 459first strand
Strand 2
A
527 533parallel
Strand 3
A
590 594anti-parallel
Strand 4
A
560 565anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
577 579first strand
Strand 2
A
1059 1061parallel
Strand 3
A
1067 1069anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1181 1182first strand
Strand 2
A
605 608anti-parallel
Strand 3
A
1204 1211anti-parallel
Strand 4
A
1235 1240anti-parallel
Strand 5
A
1228 1231anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
641 642first strand
Strand 2
A
614 615parallel
Strand 3
A
656 659parallel
Strand 4
A
873 876parallel
Strand 5
A
1161 1169anti-parallel
Strand 6
A
922 929anti-parallel
Strand 7
A
1134 1135anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
707 708first strand
Strand 2
A
857 858anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
710 714first strand
Strand 2
A
758 767anti-parallel
Strand 3
A
815 823anti-parallel
Strand 4
A
787 790anti-parallel
Strand 5
A
795 796anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
745 746first strand
Strand 2
A
836 840anti-parallel
Strand 3
A
770 775anti-parallel
Strand 4
A
807 810anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
843 844first strand
Strand 2
A
852 853anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
886 887first strand
Strand 2
A
894 895anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
909 915first strand
Strand 2
A
1149 1155anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
947 949first strand
Strand 2
A
986 989anti-parallel
Strand 3
A
1048 1055anti-parallel
Strand 4
A
1013 1019anti-parallel
Strand 5
A
1027 1028anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
999 1002first strand
Strand 2
A
1036 1039anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1099 1102first strand
Strand 2
A
1116 1124anti-parallel
Strand 3
A
1109 1111anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1099 1102first strand
Strand 2
A
1116 1124anti-parallel
Strand 3
A
1137 1138anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1195 1197first strand
Strand 2
A
1246 1251anti-parallel
Strand 3
A
1217 1219anti-parallel
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