Analysis of interatomic Contacts of Structural Units in PDB entry:
6WC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WC2 entry

There are 15 chains in PDB entry 6WC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLU 92
B
 LYS 5GLU 92
C
 GLY 2ARG 90
D
 GLY 2ARG 94
E
 A 1 G 21
F
 C 1 T 21
G
 A 1 G 21
H
 C 1 T 21
I
 GLY 2GLU 92
J
 GLY 2HIS 93
K
 A 1 G 21
L
 C 1 T 21
M
 ARG 142ARG 195
N
 ARG 142LYS 194
O
 VAL 143ARG 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6WC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 40Right-handed alpha
Helix 2
AA2
A
61 72Right-handed alpha
Helix 3
AA3
A
80 91Right-handed alpha
Helix 4
AA4
B
13 40Right-handed alpha
Helix 5
AA5
B
61 72Right-handed alpha
Helix 6
AA6
B
80 91Right-handed alpha
Helix 7
AA7
C
13 40Right-handed alpha
Helix 8
AA8
C
61 72Right-handed alpha
Helix 9
AA9
C
80 89Right-handed alpha
Helix 10
AB1
D
13 40Right-handed alpha
Helix 11
AB2
D
61 72Right-handed alpha
Helix 12
AB3
D
80 90Right-handed alpha
Helix 13
AB4
I
13 40Right-handed alpha
Helix 14
AB5
I
61 71Right-handed alpha
Helix 15
AB6
I
80 91Right-handed alpha
Helix 16
AB7
J
13 39Right-handed alpha
Helix 17
AB8
J
61 71Right-handed alpha
Helix 18
AB9
J
80 92Right-handed alpha
Helix 19
AC1
M
146 160Right-handed alpha
Helix 20
AC2
M
164 176Right-handed alpha
Helix 21
AC3
M
178 194Right-handed alpha
Helix 22
AC4
N
146 160Right-handed alpha
Helix 23
AC5
N
164 176Right-handed alpha
Helix 24
AC6
N
178 194Right-handed alpha
Helix 25
AC7
O
146 160Right-handed alpha
Helix 26
AC8
O
164 176Right-handed alpha
Helix 27
AC9
O
178 194Right-handed alpha
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There are 3 sheets in PDB entry 6WC2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
B
54 58parallel
Strand 3
B
42 48anti-parallel
Strand 4
A
42 48anti-parallel
Strand 5
A
54 58anti-parallel
Strand 6
B
78 79parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 79first strand
Strand 2
D
54 58parallel
Strand 3
D
42 48anti-parallel
Strand 4
C
42 48anti-parallel
Strand 5
C
54 58anti-parallel
Strand 6
D
77 79parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
77 79first strand
Strand 2
J
54 58parallel
Strand 3
J
42 48anti-parallel
Strand 4
I
42 48anti-parallel
Strand 5
I
54 58anti-parallel
Strand 6
J
77 79parallel
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