Analysis of interatomic Contacts of Structural Units in PDB entry:
6WCE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WCE entry

There is 1 chain in PDB entry 6WCE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1LYS 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6WCE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 27Right-handed alpha
Helix 2
AA2
A
36 47Right-handed alpha
Helix 3
AA3
A
61 70Right-handed alpha
Helix 4
AA4
A
78 84Right-handed 310
Helix 5
AA5
A
85 87Right-handed 310
Helix 6
AA6
A
88 96Right-handed alpha
Helix 7
AA7
A
113 120Right-handed alpha
Helix 8
AA8
A
127 136Right-handed 310
Helix 9
AA9
A
147 162Right-handed alpha
Helix 10
AB1
A
162 175Right-handed alpha
Helix 11
AB2
A
182 192Right-handed alpha
Helix 12
AB3
A
202 211Right-handed alpha
Helix 13
AB4
A
239 251Right-handed alpha
Helix 14
AB5
A
252 264Right-handed alpha
Helix 15
AB6
A
282 286Right-handed 310
Helix 16
AB7
A
292 297Right-handed alpha
Helix 17
AB8
A
298 313Right-handed alpha
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There are 2 sheets in PDB entry 6WCE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 34first strand
Strand 2
A
2 8parallel
Strand 3
A
55 60parallel
Strand 4
A
226 233anti-parallel
Strand 5
A
100 112anti-parallel
Strand 6
A
215 218anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 181first strand
Strand 2
A
139 142parallel
Strand 3
A
197 201parallel
Strand 4
A
100 112anti-parallel
Strand 5
A
268 269anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il