Analysis of interatomic Contacts of Structural Units in PDB entry:
6WCI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WCI entry

There are 6 chains in PDB entry 6WCI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 14HIS 237
A
 MET 239HIS 375
A
 ALA 377GLY 418
B
 ALA 15HIS 237
B
 MET 239HIS 375
B
 ALA 377LEU 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6WCI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 24Right-handed alpha
Helix 2
AA2
A
25 29Right-handed 310
Helix 3
AA3
A
49 63Right-handed alpha
Helix 4
AA4
A
72 94Right-handed alpha
Helix 5
AA5
A
96 98Right-handed 310
Helix 6
AA6
A
105 117Right-handed alpha
Helix 7
AA7
A
135 138Right-handed 310
Helix 8
AA8
A
139 150Right-handed alpha
Helix 9
AA9
A
165 173Right-handed alpha
Helix 10
AB1
A
194 205Right-handed alpha
Helix 11
AB2
A
223 228Right-handed alpha
Helix 12
AB3
A
237 239Right-handed 310
Helix 13
AB4
A
251 258Right-handed alpha
Helix 14
AB5
A
282 286Right-handed 310
Helix 15
AB6
A
291 309Right-handed alpha
Helix 16
AB7
A
309 329Right-handed alpha
Helix 17
AB8
A
355 366Right-handed alpha
Helix 18
AB9
A
377 385Right-handed alpha
Helix 19
AC1
A
399 417Right-handed alpha
Helix 20
AC2
B
17 23Right-handed alpha
Helix 21
AC3
B
24 29Right-handed 310
Helix 22
AC4
B
49 63Right-handed alpha
Helix 23
AC5
B
72 94Right-handed alpha
Helix 24
AC6
B
96 98Right-handed 310
Helix 25
AC7
B
105 117Right-handed alpha
Helix 26
AC8
B
135 138Right-handed 310
Helix 27
AC9
B
139 150Right-handed alpha
Helix 28
AD1
B
165 173Right-handed alpha
Helix 29
AD2
B
194 205Right-handed alpha
Helix 30
AD3
B
223 228Right-handed alpha
Helix 31
AD4
B
237 239Right-handed 310
Helix 32
AD5
B
251 258Right-handed alpha
Helix 33
AD6
B
282 286Right-handed 310
Helix 34
AD7
B
291 309Right-handed alpha
Helix 35
AD8
B
309 329Right-handed alpha
Helix 36
AD9
B
355 366Right-handed alpha
Helix 37
AE1
B
377 385Right-handed alpha
Helix 38
AE2
B
399 415Right-handed alpha
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There are 10 sheets in PDB entry 6WCI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
35 36anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
368 369parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 103first strand
Strand 2
A
246 250anti-parallel
Strand 3
A
231 235anti-parallel
Strand 4
A
208 212parallel
Strand 5
A
177 183parallel
Strand 6
A
127 131parallel
Strand 7
A
152 156parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 270first strand
Strand 2
A
277 278anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 337first strand
Strand 2
A
346 351anti-parallel
Strand 3
A
389 393anti-parallel
Strand 4
A
371 373anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 32first strand
Strand 2
B
35 36anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 39first strand
Strand 2
B
368 369parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 103first strand
Strand 2
B
246 250anti-parallel
Strand 3
B
231 235anti-parallel
Strand 4
B
208 212parallel
Strand 5
B
177 183parallel
Strand 6
B
127 131parallel
Strand 7
B
152 156parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 270first strand
Strand 2
B
277 278anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 337first strand
Strand 2
B
346 351anti-parallel
Strand 3
B
389 393anti-parallel
Strand 4
B
371 373anti-parallel
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