Analysis of interatomic Contacts of Structural Units in PDB entry:
6WCS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WCS entry

There are 2 chains in PDB entry 6WCS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -3VAL 434
B
 GLU 4VAL 434
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6WCS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 36Right-handed alpha
Helix 2
AA2
A
52 67Right-handed alpha
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
106 113Right-handed alpha
Helix 5
AA5
A
120 125Right-handed 310
Helix 6
AA6
A
131 137Right-handed 310
Helix 7
AA7
A
164 182Right-handed alpha
Helix 8
AA8
A
211 215Right-handed 310
Helix 9
AA9
A
234 248Right-handed alpha
Helix 10
AB1
A
254 270Right-handed alpha
Helix 11
AB2
A
313 319Right-handed alpha
Helix 12
AB3
A
320 334Right-handed alpha
Helix 13
AB4
A
336 349Right-handed alpha
Helix 14
AB5
A
371 375Right-handed 310
Helix 15
AB6
A
414 423Right-handed alpha
Helix 16
AB7
A
424 431Right-handed alpha
Helix 17
AB8
B
30 36Right-handed alpha
Helix 18
AB9
B
52 67Right-handed alpha
Helix 19
AC1
B
68 72Right-handed 310
Helix 20
AC2
B
106 112Right-handed alpha
Helix 21
AC3
B
119 125Right-handed 310
Helix 22
AC4
B
131 137Right-handed 310
Helix 23
AC5
B
164 182Right-handed alpha
Helix 24
AC6
B
234 248Right-handed alpha
Helix 25
AC7
B
254 270Right-handed alpha
Helix 26
AC8
B
313 319Right-handed alpha
Helix 27
AC9
B
320 334Right-handed alpha
Helix 28
AD1
B
336 350Right-handed alpha
Helix 29
AD2
B
371 375Right-handed 310
Helix 30
AD3
B
414 423Right-handed alpha
Helix 31
AD4
B
424 431Right-handed alpha
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There are 7 sheets in PDB entry 6WCS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 13first strand
Strand 2
A
95 102anti-parallel
Strand 3
A
141 148parallel
Strand 4
A
152 158anti-parallel
Strand 5
A
42 48anti-parallel
Strand 6
A
384 387anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
84 89anti-parallel
Strand 3
A
73 78anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 312first strand
Strand 2
A
278 286anti-parallel
Strand 3
A
362 366parallel
Strand 4
A
395 400parallel
Strand 5
A
407 413anti-parallel
Strand 6
A
227 233anti-parallel
Strand 7
A
432 434anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 13first strand
Strand 2
B
95 102anti-parallel
Strand 3
B
141 148parallel
Strand 4
B
152 158anti-parallel
Strand 5
B
42 48anti-parallel
Strand 6
B
384 387anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 28first strand
Strand 2
B
84 90anti-parallel
Strand 3
B
73 78anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 116first strand
Strand 2
B
227 233anti-parallel
Strand 3
B
407 413anti-parallel
Strand 4
B
395 400anti-parallel
Strand 5
B
362 366parallel
Strand 6
B
278 286parallel
Strand 7
B
304 312anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 116first strand
Strand 2
B
227 233anti-parallel
Strand 3
B
432 433anti-parallel
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