Analysis of interatomic Contacts of Structural Units in PDB entry:
6WCW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WCW entry

There are 2 chains in PDB entry 6WCW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 VAL 7LEU 182
A
 ASN 697ALA 943
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6WCW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
20 31Right-handed alpha
Helix 2
AA2
B
75 79Right-handed 310
Helix 3
AA3
B
92 98Right-handed alpha
Helix 4
AA4
B
98 111Right-handed alpha
Helix 5
AA5
B
114 118Right-handed 310
Helix 6
AA6
B
135 146Right-handed alpha
Helix 7
AA7
B
161 178Right-handed alpha
Helix 8
AA8
A
707 717Right-handed alpha
Helix 9
AA9
A
729 736Right-handed 310
Helix 10
AB1
A
758 764Right-handed alpha
Helix 11
AB2
A
774 784Right-handed alpha
Helix 12
AB3
A
792 796Right-handed alpha
Helix 13
AB4
A
798 803Right-handed alpha
Helix 14
AB5
A
803 824Right-handed alpha
Helix 15
AB6
A
829 836Right-handed alpha
Helix 16
AB7
A
840 846Right-handed alpha
Helix 17
AB8
A
851 860Right-handed alpha
Helix 18
AB9
A
862 881Right-handed alpha
Helix 19
AC1
A
884 888Right-handed 310
Helix 20
AC2
A
929 943Right-handed alpha
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There are 5 sheets in PDB entry 6WCW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 52first strand
Strand 2
B
55 63anti-parallel
Strand 3
B
8 14parallel
Strand 4
B
83 89parallel
Strand 5
B
120 125parallel
Strand 6
B
151 154parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
737 738first strand
Strand 2
A
745 746anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
754 756first strand
Strand 2
A
771 773anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
790 791first strand
Strand 2
A
849 850anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
909 911first strand
Strand 2
A
918 920anti-parallel
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