Analysis of interatomic Contacts of Structural Units in PDB entry:
6WCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WCZ entry

There are 2 chains in PDB entry 6WCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 140GLY 509
B
 GLU 6LEU 886
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6WCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
140 182Right-handed alpha
Helix 2
AA2
A
194 243Right-handed alpha
Helix 3
AA3
A
256 277Right-handed alpha
Helix 4
AA4
A
294 314Right-handed alpha
Helix 5
AA5
A
387 392Right-handed alpha
Helix 6
AA6
A
423 427Right-handed 310
Helix 7
AA7
A
460 474Right-handed alpha
Helix 8
AA8
A
495 508Right-handed alpha
Helix 9
AA9
B
8 10Right-handed 310
Helix 10
AB1
B
11 19Right-handed alpha
Helix 11
AB2
B
20 29Right-handed alpha
Helix 12
AB3
B
39 47Right-handed alpha
Helix 13
AB4
B
58 69Right-handed alpha
Helix 14
AB5
B
85 93Right-handed alpha
Helix 15
AB6
B
131 135Right-handed 310
Helix 16
AB7
B
153 172Right-handed alpha
Helix 17
AB8
B
188 201Right-handed alpha
Helix 18
AB9
B
228 237Right-handed alpha
Helix 19
AC1
B
238 243Right-handed alpha
Helix 20
AC2
B
274 277Right-handed 310
Helix 21
AC3
B
278 287Right-handed alpha
Helix 22
AC4
B
323 328Right-handed alpha
Helix 23
AC5
B
348 360Right-handed alpha
Helix 24
AC6
B
368 390Right-handed alpha
Helix 25
AC7
B
396 407Right-handed alpha
Helix 26
AC8
B
422 427Right-handed alpha
Helix 27
AC9
B
430 446Right-handed alpha
Helix 28
AD1
B
479 491Right-handed alpha
Helix 29
AD2
B
491 496Right-handed alpha
Helix 30
AD3
B
500 505Right-handed alpha
Helix 31
AD4
B
515 522Right-handed alpha
Helix 32
AD5
B
539 543Right-handed 310
Helix 33
AD6
B
544 549Right-handed alpha
Helix 34
AD7
B
550 558Right-handed 310
Helix 35
AD8
B
559 574Right-handed alpha
Helix 36
AD9
B
585 589Right-handed 310
Helix 37
AE1
B
607 628Right-handed alpha
Helix 38
AE2
B
641 658Right-handed alpha
Helix 39
AE3
B
674 679Right-handed 310
Helix 40
AE4
B
680 687Right-handed alpha
Helix 41
AE5
B
733 738Right-handed alpha
Helix 42
AE6
B
750 767Right-handed alpha
Helix 43
AE7
B
772 785Right-handed alpha
Helix 44
AE8
B
803 807Right-handed 310
Helix 45
AE9
B
810 820Right-handed alpha
Helix 46
AF1
B
842 849Right-handed alpha
Helix 47
AF2
B
855 862Right-handed alpha
Helix 48
AF3
B
865 876Right-handed alpha
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There are 9 sheets in PDB entry 6WCZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 320first strand
Strand 2
A
343 345anti-parallel
Strand 3
A
397 398anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 335first strand
Strand 2
A
454 456parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 386first strand
Strand 2
A
357 363anti-parallel
Strand 3
A
431 439anti-parallel
Strand 4
A
442 446anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 378first strand
Strand 2
A
405 406anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 127first strand
Strand 2
B
97 103parallel
Strand 3
B
75 80parallel
Strand 4
B
142 145parallel
Strand 5
B
178 183parallel
Strand 6
B
219 222anti-parallel
Strand 7
B
205 207anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
305 310first strand
Strand 2
B
592 596anti-parallel
Strand 3
B
578 581anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
453 457first strand
Strand 2
B
474 478anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
660 661first strand
Strand 2
B
668 669anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
714 718first strand
Strand 2
B
726 730anti-parallel
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