Analysis of interatomic Contacts of Structural Units in PDB entry:
6WE5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WE5 entry

There are 3 chains in PDB entry 6WE5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3PHE 208
B
 LYS 3PHE 208
C
 THR 4MET 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 6WE5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 85Right-handed alpha
Helix 2
AA2
A
148 152Right-handed 310
Helix 3
AA3
A
153 167Right-handed alpha
Helix 4
AA4
A
170 176Right-handed alpha
Helix 5
AA5
A
189 208Right-handed alpha
Helix 6
AA6
B
73 85Right-handed alpha
Helix 7
AA7
B
148 152Right-handed 310
Helix 8
AA8
B
153 167Right-handed alpha
Helix 9
AA9
B
170 176Right-handed alpha
Helix 10
AB1
B
189 208Right-handed alpha
Helix 11
AB2
C
73 84Right-handed alpha
Helix 12
AB3
C
148 152Right-handed 310
Helix 13
AB4
C
153 167Right-handed alpha
Helix 14
AB5
C
170 176Right-handed alpha
Helix 15
AB6
C
190 209Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 6WE5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 188first strand
Strand 2
A
111 124anti-parallel
Strand 3
A
132 137anti-parallel
Strand 4
A
97 101parallel
Strand 5
A
63 66anti-parallel
Strand 6
A
25 31anti-parallel
Strand 7
A
111 124anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
48 53anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 91first strand
Strand 2
A
128 129parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 188first strand
Strand 2
B
111 124anti-parallel
Strand 3
B
132 137anti-parallel
Strand 4
B
97 101parallel
Strand 5
B
63 66anti-parallel
Strand 6
B
25 31anti-parallel
Strand 7
B
111 124anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 41first strand
Strand 2
B
48 53anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 91first strand
Strand 2
B
128 129parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 189first strand
Strand 2
C
111 124anti-parallel
Strand 3
C
132 137anti-parallel
Strand 4
C
97 101parallel
Strand 5
C
63 66anti-parallel
Strand 6
C
25 31anti-parallel
Strand 7
C
111 124anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 41first strand
Strand 2
C
48 53anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
90 91first strand
Strand 2
C
128 129parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il