Analysis of interatomic Contacts of Structural Units in PDB entry:
6WEA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WEA entry

There are 12 chains in PDB entry 6WEA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 345	MET 507
B	THR 345	MET 507
C	THR 345	MET 507
D	SER 346	MET 507
E	C 1	G 5
E	C 7	C 10
F	C 1	G 5
F	C 7	C 10
G	C 1	G 5
G	C 7	C 10
H	C 1	G 5
H	C 7	C 10

There are 32 helices in PDB entry 6WEA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	345	353	Right-handed alpha
Helix 2	AA2	A	364	375	Right-handed alpha
Helix 3	AA3	A	380	394	Right-handed alpha
Helix 4	AA4	A	436	440	Right-handed 310
Helix 5	AA5	A	456	459	Right-handed 310
Helix 6	AA6	A	463	467	Right-handed 310
Helix 7	AA7	A	481	492	Right-handed alpha
Helix 8	AA8	A	500	507	Right-handed alpha
Helix 9	AA9	B	346	353	Right-handed alpha
Helix 10	AB1	B	364	375	Right-handed alpha
Helix 11	AB2	B	380	394	Right-handed alpha
Helix 12	AB3	B	436	440	Right-handed 310
Helix 13	AB4	B	456	459	Right-handed 310
Helix 14	AB5	B	463	467	Right-handed 310
Helix 15	AB6	B	481	492	Right-handed alpha
Helix 16	AB7	B	500	507	Right-handed alpha
Helix 17	AB8	C	346	352	Right-handed alpha
Helix 18	AB9	C	364	375	Right-handed alpha
Helix 19	AC1	C	380	394	Right-handed alpha
Helix 20	AC2	C	436	440	Right-handed 310
Helix 21	AC3	C	456	459	Right-handed 310
Helix 22	AC4	C	463	467	Right-handed 310
Helix 23	AC5	C	481	492	Right-handed alpha
Helix 24	AC6	C	499	506	Right-handed alpha
Helix 25	AC7	D	347	352	Right-handed alpha
Helix 26	AC8	D	364	375	Right-handed alpha
Helix 27	AC9	D	380	394	Right-handed alpha
Helix 28	AD1	D	436	440	Right-handed 310
Helix 29	AD2	D	456	459	Right-handed 310
Helix 30	AD3	D	463	467	Right-handed 310
Helix 31	AD4	D	481	492	Right-handed alpha
Helix 32	AD5	D	499	506	Right-handed alpha

There are 8 sheets in PDB entry 6WEA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	377	first strand
Strand 2	A	443	449	anti-parallel
Strand 3	A	411	415	anti-parallel
Strand 4	A	396	403	anti-parallel
Strand 5	A	355	362	parallel
Strand 6	A	479	480	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	408	409	first strand
Strand 2	A	453	454	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	377	first strand
Strand 2	B	443	449	anti-parallel
Strand 3	B	411	415	anti-parallel
Strand 4	B	396	403	anti-parallel
Strand 5	B	355	362	parallel
Strand 6	B	479	480	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	408	409	first strand
Strand 2	B	453	454	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	377	first strand
Strand 2	C	443	449	anti-parallel
Strand 3	C	411	415	anti-parallel
Strand 4	C	396	403	anti-parallel
Strand 5	C	355	362	parallel
Strand 6	C	479	480	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	408	409	first strand
Strand 2	C	453	454	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	377	first strand
Strand 2	D	443	449	anti-parallel
Strand 3	D	411	415	anti-parallel
Strand 4	D	396	403	anti-parallel
Strand 5	D	355	362	parallel
Strand 6	D	479	480	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	408	409	first strand
Strand 2	D	453	454	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WEA

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WEA