Analysis of interatomic Contacts of Structural Units in PDB entry:
6WEF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WEF entry

There are 5 chains in PDB entry 6WEF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 2LYS 159
D
 GLY 1LYS 159
A
 GLY 2LYS 159
B
 GLY 1LYS 159
E
 GLY 2LEU 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6WEF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
35 39Right-handed 310
Helix 2
AA2
C
123 128Right-handed 310
Helix 3
AA3
D
35 39Right-handed 310
Helix 4
AA4
D
123 128Right-handed 310
Helix 5
AA5
A
35 39Right-handed 310
Helix 6
AA6
A
123 128Right-handed 310
Helix 7
AA7
B
35 39Right-handed 310
Helix 8
AA8
B
123 128Right-handed 310
Helix 9
AA9
E
35 39Right-handed 310
Helix 10
AB1
E
123 128Right-handed 310
Helix 11
AB2
F
35 39Right-handed 310
Helix 12
AB3
F
123 128Right-handed 310
Helix 13
AB4
G
35 39Right-handed 310
Helix 14
AB5
G
123 128Right-handed 310
Helix 15
AB6
H
35 39Right-handed 310
Helix 16
AB7
H
123 128Right-handed 310
Helix 17
AB8
I
35 39Right-handed 310
Helix 18
AB9
I
123 128Right-handed 310
Helix 19
AC1
J
35 39Right-handed 310
Helix 20
AC2
J
123 128Right-handed 310
Helix 21
AC3
K
35 39Right-handed 310
Helix 22
AC4
K
123 128Right-handed 310
Helix 23
AC5
L
35 39Right-handed 310
Helix 24
AC6
L
123 128Right-handed 310
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There are 25 sheets in PDB entry 6WEF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 11first strand
Strand 2
C
15 22anti-parallel
Strand 3
C
41 49anti-parallel
Strand 4
C
93 100anti-parallel
Strand 5
C
79 90anti-parallel
Strand 6
C
67 74anti-parallel
Strand 7
C
113 122anti-parallel
Strand 8
C
146 154anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 28first strand
Strand 2
D
131 132anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 12first strand
Strand 2
D
15 22anti-parallel
Strand 3
D
41 49anti-parallel
Strand 4
D
93 100anti-parallel
Strand 5
D
86 90anti-parallel
Strand 6
C
130 132parallel
Strand 7
D
27 28anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 84first strand
Strand 2
D
67 74anti-parallel
Strand 3
D
113 122anti-parallel
Strand 4
D
146 154anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 12first strand
Strand 2
A
15 22anti-parallel
Strand 3
A
41 49anti-parallel
Strand 4
A
93 100anti-parallel
Strand 5
A
79 90anti-parallel
Strand 6
B
130 132parallel
Strand 7
A
27 28anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 12first strand
Strand 2
A
15 22anti-parallel
Strand 3
A
41 49anti-parallel
Strand 4
A
93 100anti-parallel
Strand 5
A
79 90anti-parallel
Strand 6
A
67 74anti-parallel
Strand 7
A
113 122anti-parallel
Strand 8
A
146 154anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 12first strand
Strand 2
B
15 22anti-parallel
Strand 3
B
41 49anti-parallel
Strand 4
B
93 100anti-parallel
Strand 5
B
86 90anti-parallel
Strand 6
A
130 132parallel
Strand 7
B
27 28anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 84first strand
Strand 2
B
67 74anti-parallel
Strand 3
B
113 122anti-parallel
Strand 4
B
146 154anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 12first strand
Strand 2
E
15 22anti-parallel
Strand 3
E
41 49anti-parallel
Strand 4
E
93 100anti-parallel
Strand 5
E
80 90anti-parallel
Strand 6
F
130 132parallel
Strand 7
E
27 28anti-parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 12first strand
Strand 2
E
15 22anti-parallel
Strand 3
E
41 49anti-parallel
Strand 4
E
93 100anti-parallel
Strand 5
E
80 90anti-parallel
Strand 6
E
67 74anti-parallel
Strand 7
E
113 122anti-parallel
Strand 8
E
146 154anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
4 5first strand
Strand 2
F
15 22anti-parallel
Strand 3
F
10 12anti-parallel
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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
4 5first strand
Strand 2
F
15 22anti-parallel
Strand 3
F
41 49anti-parallel
Strand 4
F
93 100anti-parallel
Strand 5
F
86 90anti-parallel
Strand 6
E
130 132parallel
Strand 7
F
27 28anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
80 84first strand
Strand 2
F
67 74anti-parallel
Strand 3
F
113 122anti-parallel
Strand 4
F
146 154anti-parallel
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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
4 12first strand
Strand 2
G
15 22anti-parallel
Strand 3
G
41 49anti-parallel
Strand 4
G
93 100anti-parallel
Strand 5
G
80 90anti-parallel
Strand 6
H
130 132parallel
Strand 7
G
27 28anti-parallel
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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
4 12first strand
Strand 2
G
15 22anti-parallel
Strand 3
G
41 49anti-parallel
Strand 4
G
93 100anti-parallel
Strand 5
G
80 90anti-parallel
Strand 6
G
67 74anti-parallel
Strand 7
G
113 122anti-parallel
Strand 8
G
146 154anti-parallel
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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
4 12first strand
Strand 2
H
15 22anti-parallel
Strand 3
H
41 49anti-parallel
Strand 4
H
93 100anti-parallel
Strand 5
H
86 90anti-parallel
Strand 6
G
130 132parallel
Strand 7
H
27 28anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
80 84first strand
Strand 2
H
67 74anti-parallel
Strand 3
H
113 122anti-parallel
Strand 4
H
146 154anti-parallel
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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
6 12first strand
Strand 2
I
15 22anti-parallel
Strand 3
I
41 49anti-parallel
Strand 4
I
93 100anti-parallel
Strand 5
I
80 90anti-parallel
Strand 6
J
130 132parallel
Strand 7
I
27 28anti-parallel
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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
6 12first strand
Strand 2
I
15 22anti-parallel
Strand 3
I
41 49anti-parallel
Strand 4
I
93 100anti-parallel
Strand 5
I
80 90anti-parallel
Strand 6
I
67 74anti-parallel
Strand 7
I
113 122anti-parallel
Strand 8
I
146 154anti-parallel
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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
4 12first strand
Strand 2
J
15 22anti-parallel
Strand 3
J
41 49anti-parallel
Strand 4
J
93 100anti-parallel
Strand 5
J
86 90anti-parallel
Strand 6
I
130 132parallel
Strand 7
J
27 28anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
80 84first strand
Strand 2
J
67 74anti-parallel
Strand 3
J
113 122anti-parallel
Strand 4
J
146 154anti-parallel
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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
4 12first strand
Strand 2
K
15 22anti-parallel
Strand 3
K
41 49anti-parallel
Strand 4
K
93 100anti-parallel
Strand 5
K
86 90anti-parallel
Strand 6
L
130 132parallel
Strand 7
K
27 28anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
80 84first strand
Strand 2
K
67 74anti-parallel
Strand 3
K
114 122anti-parallel
Strand 4
K
146 153anti-parallel
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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 12first strand
Strand 2
L
15 22anti-parallel
Strand 3
L
41 49anti-parallel
Strand 4
L
93 100anti-parallel
Strand 5
L
86 90anti-parallel
Strand 6
K
130 132parallel
Strand 7
L
27 28anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
80 84first strand
Strand 2
L
67 74anti-parallel
Strand 3
L
113 122anti-parallel
Strand 4
L
146 154anti-parallel
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