Analysis of interatomic Contacts of Structural Units in PDB entry:
6WEK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WEK entry

There are 4 chains in PDB entry 6WEK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 103	ASP 620
B	VAL 103	ASP 620
C	VAL 103	ASP 620
D	VAL 103	ASP 620

There are 88 helices in PDB entry 6WEK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	103	111	Right-handed alpha
Helix 2	AA2	A	119	145	Right-handed alpha
Helix 3	AA3	A	193	224	Right-handed alpha
Helix 4	AA4	A	236	246	Right-handed alpha
Helix 5	AA5	A	248	256	Right-handed alpha
Helix 6	AA6	A	259	265	Right-handed alpha
Helix 7	AA7	A	276	285	Right-handed 310
Helix 8	AA8	A	286	301	Right-handed alpha
Helix 9	AA9	A	303	335	Right-handed alpha
Helix 10	AB1	A	358	375	Right-handed alpha
Helix 11	AB2	A	385	414	Right-handed alpha
Helix 12	AB3	A	415	418	Right-handed 310
Helix 13	AB4	A	419	438	Right-handed alpha
Helix 14	AB5	A	441	458	Right-handed alpha
Helix 15	AB6	A	464	471	Right-handed alpha
Helix 16	AB7	A	472	484	Right-handed alpha
Helix 17	AB8	A	484	489	Right-handed alpha
Helix 18	AB9	A	491	496	Right-handed alpha
Helix 19	AC1	A	498	507	Right-handed alpha
Helix 20	AC2	A	559	564	Right-handed alpha
Helix 21	AC3	A	592	602	Right-handed alpha
Helix 22	AC4	A	602	620	Right-handed alpha
Helix 23	AC5	B	104	111	Right-handed alpha
Helix 24	AC6	B	119	145	Right-handed alpha
Helix 25	AC7	B	193	224	Right-handed alpha
Helix 26	AC8	B	236	246	Right-handed alpha
Helix 27	AC9	B	248	256	Right-handed alpha
Helix 28	AD1	B	259	265	Right-handed alpha
Helix 29	AD2	B	276	285	Right-handed 310
Helix 30	AD3	B	286	301	Right-handed alpha
Helix 31	AD4	B	303	335	Right-handed alpha
Helix 32	AD5	B	358	375	Right-handed alpha
Helix 33	AD6	B	385	414	Right-handed alpha
Helix 34	AD7	B	415	418	Right-handed 310
Helix 35	AD8	B	419	438	Right-handed alpha
Helix 36	AD9	B	441	458	Right-handed alpha
Helix 37	AE1	B	464	471	Right-handed alpha
Helix 38	AE2	B	472	484	Right-handed alpha
Helix 39	AE3	B	484	489	Right-handed alpha
Helix 40	AE4	B	491	496	Right-handed alpha
Helix 41	AE5	B	498	507	Right-handed alpha
Helix 42	AE6	B	559	564	Right-handed alpha
Helix 43	AE7	B	592	602	Right-handed alpha
Helix 44	AE8	B	602	620	Right-handed alpha
Helix 45	AE9	C	104	111	Right-handed alpha
Helix 46	AF1	C	119	145	Right-handed alpha
Helix 47	AF2	C	193	224	Right-handed alpha
Helix 48	AF3	C	236	246	Right-handed alpha
Helix 49	AF4	C	248	256	Right-handed alpha
Helix 50	AF5	C	259	265	Right-handed alpha
Helix 51	AF6	C	276	285	Right-handed 310
Helix 52	AF7	C	286	301	Right-handed alpha
Helix 53	AF8	C	303	335	Right-handed alpha
Helix 54	AF9	C	358	375	Right-handed alpha
Helix 55	AG1	C	385	414	Right-handed alpha
Helix 56	AG2	C	415	418	Right-handed 310
Helix 57	AG3	C	419	438	Right-handed alpha
Helix 58	AG4	C	441	458	Right-handed alpha
Helix 59	AG5	C	464	471	Right-handed alpha
Helix 60	AG6	C	472	484	Right-handed alpha
Helix 61	AG7	C	484	489	Right-handed alpha
Helix 62	AG8	C	491	496	Right-handed alpha
Helix 63	AG9	C	498	507	Right-handed alpha
Helix 64	AH1	C	559	564	Right-handed alpha
Helix 65	AH2	C	592	602	Right-handed alpha
Helix 66	AH3	C	602	620	Right-handed alpha
Helix 67	AH4	D	104	111	Right-handed alpha
Helix 68	AH5	D	119	145	Right-handed alpha
Helix 69	AH6	D	193	224	Right-handed alpha
Helix 70	AH7	D	236	246	Right-handed alpha
Helix 71	AH8	D	248	256	Right-handed alpha
Helix 72	AH9	D	259	265	Right-handed alpha
Helix 73	AI1	D	276	285	Right-handed 310
Helix 74	AI2	D	286	301	Right-handed alpha
Helix 75	AI3	D	303	335	Right-handed alpha
Helix 76	AI4	D	358	375	Right-handed alpha
Helix 77	AI5	D	385	414	Right-handed alpha
Helix 78	AI6	D	415	418	Right-handed 310
Helix 79	AI7	D	419	438	Right-handed alpha
Helix 80	AI8	D	441	458	Right-handed alpha
Helix 81	AI9	D	464	471	Right-handed alpha
Helix 82	AJ1	D	472	484	Right-handed alpha
Helix 83	AJ2	D	484	489	Right-handed alpha
Helix 84	AJ3	D	491	496	Right-handed alpha
Helix 85	AJ4	D	498	507	Right-handed alpha
Helix 86	AJ5	D	559	564	Right-handed alpha
Helix 87	AJ6	D	592	602	Right-handed alpha
Helix 88	AJ7	D	602	620	Right-handed alpha

There are 20 sheets in PDB entry 6WEK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	154	first strand
Strand 2	A	187	188	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	159	first strand
Strand 2	A	168	170	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	228	first strand
Strand 2	A	233	234	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	510	514	first strand
Strand 2	A	585	591	anti-parallel
Strand 3	A	529	535	anti-parallel
Strand 4	A	557	558	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	519	521	first strand
Strand 2	A	579	581	anti-parallel
Strand 3	A	538	540	anti-parallel
Strand 4	A	550	552	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	154	first strand
Strand 2	B	187	188	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	159	first strand
Strand 2	B	168	170	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	228	first strand
Strand 2	B	233	234	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	510	514	first strand
Strand 2	B	585	591	anti-parallel
Strand 3	B	529	535	anti-parallel
Strand 4	B	557	558	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	521	first strand
Strand 2	B	579	581	anti-parallel
Strand 3	B	538	540	anti-parallel
Strand 4	B	550	552	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	154	first strand
Strand 2	C	187	188	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	159	first strand
Strand 2	C	168	170	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	228	first strand
Strand 2	C	233	234	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	510	514	first strand
Strand 2	C	585	591	anti-parallel
Strand 3	C	529	535	anti-parallel
Strand 4	C	557	558	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	519	521	first strand
Strand 2	C	579	581	anti-parallel
Strand 3	C	538	540	anti-parallel
Strand 4	C	550	552	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	153	154	first strand
Strand 2	D	187	188	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	159	first strand
Strand 2	D	168	170	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	227	228	first strand
Strand 2	D	233	234	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	510	514	first strand
Strand 2	D	585	591	anti-parallel
Strand 3	D	529	535	anti-parallel
Strand 4	D	557	558	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	519	521	first strand
Strand 2	D	579	581	anti-parallel
Strand 3	D	538	540	anti-parallel
Strand 4	D	550	552	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WEK

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WEK