Analysis of interatomic Contacts of Structural Units in PDB entry:
6WF3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WF3 entry

There are 12 chains in PDB entry 6WF3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5LEU 154
B
 ARG 5LEU 154
C
 ARG 5LEU 154
D
 ARG 5LEU 154
E
 ARG 5LEU 154
F
 ARG 5LEU 154
G
 MET 2PRO 5
H
 MET 2PRO 5
I
 MET 2PRO 5
J
 MET 2PRO 5
K
 MET 2PRO 5
L
 MET 2PRO 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6WF3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 27Right-handed alpha
Helix 2
AA2
A
32 40Right-handed alpha
Helix 3
AA3
A
41 44Right-handed 310
Helix 4
AA4
A
81 84Right-handed 310
Helix 5
AA5
A
87 104Right-handed alpha
Helix 6
AA6
A
117 126Right-handed alpha
Helix 7
AA7
B
15 27Right-handed alpha
Helix 8
AA8
B
32 40Right-handed alpha
Helix 9
AA9
B
41 44Right-handed 310
Helix 10
AB1
B
81 84Right-handed 310
Helix 11
AB2
B
87 104Right-handed alpha
Helix 12
AB3
B
117 126Right-handed alpha
Helix 13
AB4
C
15 27Right-handed alpha
Helix 14
AB5
C
32 40Right-handed alpha
Helix 15
AB6
C
41 44Right-handed 310
Helix 16
AB7
C
81 84Right-handed 310
Helix 17
AB8
C
87 104Right-handed alpha
Helix 18
AB9
C
117 127Right-handed alpha
Helix 19
AC1
D
15 27Right-handed alpha
Helix 20
AC2
D
32 40Right-handed alpha
Helix 21
AC3
D
41 44Right-handed 310
Helix 22
AC4
D
81 84Right-handed 310
Helix 23
AC5
D
87 104Right-handed alpha
Helix 24
AC6
D
117 127Right-handed alpha
Helix 25
AC7
E
15 27Right-handed alpha
Helix 26
AC8
E
32 40Right-handed alpha
Helix 27
AC9
E
41 44Right-handed 310
Helix 28
AD1
E
81 84Right-handed 310
Helix 29
AD2
E
87 104Right-handed alpha
Helix 30
AD3
E
117 126Right-handed alpha
Helix 31
AD4
F
15 27Right-handed alpha
Helix 32
AD5
F
32 40Right-handed alpha
Helix 33
AD6
F
41 44Right-handed 310
Helix 34
AD7
F
81 84Right-handed 310
Helix 35
AD8
F
87 104Right-handed alpha
Helix 36
AD9
F
117 127Right-handed alpha
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There are 6 sheets in PDB entry 6WF3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
46 51anti-parallel
Strand 3
A
54 66anti-parallel
Strand 4
A
69 79anti-parallel
Strand 5
A
108 114parallel
Strand 6
A
147 153anti-parallel
Strand 7
A
130 135anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 10first strand
Strand 2
B
46 51anti-parallel
Strand 3
B
54 64anti-parallel
Strand 4
B
71 79anti-parallel
Strand 5
B
108 114parallel
Strand 6
B
147 153anti-parallel
Strand 7
B
130 135anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 10first strand
Strand 2
C
46 51anti-parallel
Strand 3
C
54 66anti-parallel
Strand 4
C
69 79anti-parallel
Strand 5
C
108 114parallel
Strand 6
C
147 153anti-parallel
Strand 7
C
130 135anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 10first strand
Strand 2
D
46 51anti-parallel
Strand 3
D
54 64anti-parallel
Strand 4
D
71 79anti-parallel
Strand 5
D
108 114parallel
Strand 6
D
147 153anti-parallel
Strand 7
D
130 135anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
6 10first strand
Strand 2
E
46 51anti-parallel
Strand 3
E
54 66anti-parallel
Strand 4
E
69 79anti-parallel
Strand 5
E
108 114parallel
Strand 6
E
147 153anti-parallel
Strand 7
E
130 135anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
6 10first strand
Strand 2
F
46 51anti-parallel
Strand 3
F
54 66anti-parallel
Strand 4
F
69 79anti-parallel
Strand 5
F
108 114parallel
Strand 6
F
147 153anti-parallel
Strand 7
F
130 135anti-parallel
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