Analysis of interatomic Contacts of Structural Units in PDB entry:
6WG5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WG5 entry

There is 1 chain in PDB entry 6WG5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 64TRP 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6WG5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 76Right-handed alpha
Helix 2
AA2
A
139 147Right-handed 310
Helix 3
AA3
A
148 153Right-handed alpha
Helix 4
AA4
A
153 164Right-handed alpha
Helix 5
AA5
A
165 172Right-handed 310
Helix 6
AA6
A
179 184Right-handed alpha
Helix 7
AA7
A
186 205Right-handed alpha
Helix 8
AA8
A
210 212Right-handed 310
Helix 9
AA9
A
218 234Right-handed alpha
Helix 10
AB1
A
256 260Right-handed 310
Helix 11
AB2
A
291 301Right-handed alpha
Helix 12
AB3
A
329 344Right-handed alpha
Helix 13
AB4
A
347 353Right-handed alpha
Helix 14
AB5
A
391 400Right-handed alpha
Helix 15
AB6
A
401 404Right-handed 310
Helix 16
AB7
A
412 416Right-handed 310
Helix 17
AB8
A
422 426Right-handed 310
Helix 18
AB9
A
433 440Right-handed alpha
Helix 19
AC1
A
449 462Right-handed alpha
Helix 20
AC2
A
464 475Right-handed alpha
Helix 21
AC3
A
482 502Right-handed alpha
Helix 22
AC4
A
525 535Right-handed alpha
Helix 23
AC5
A
538 544Right-handed alpha
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There are 5 sheets in PDB entry 6WG5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 122first strand
Strand 2
A
100 108anti-parallel
Strand 3
A
132 135anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 122first strand
Strand 2
A
100 108anti-parallel
Strand 3
A
87 95anti-parallel
Strand 4
A
174 178parallel
Strand 5
A
214 216parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 250first strand
Strand 2
A
261 264anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 306first strand
Strand 2
A
317 326anti-parallel
Strand 3
A
276 282anti-parallel
Strand 4
A
268 272anti-parallel
Strand 5
A
428 432parallel
Strand 6
A
513 515parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 366first strand
Strand 2
A
382 388parallel
Strand 3
A
374 379anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il