Analysis of interatomic Contacts of Structural Units in PDB entry:
6WG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WG8 entry

There are 2 chains in PDB entry 6WG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1GLU 224
B
 ASP 1GLU 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6WG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 30Right-handed 310
Helix 2
AA2
A
62 65Right-handed 310
Helix 3
AA3
A
87 91Right-handed 310
Helix 4
AA4
A
168 170Right-handed 310
Helix 5
AA5
A
213 216Right-handed 310
Helix 6
AA6
B
84 88Right-handed 310
Helix 7
AA7
B
126 131Right-handed alpha
Helix 8
AA8
B
188 193Right-handed alpha
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There are 10 sheets in PDB entry 6WG8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
119 123parallel
Strand 3
A
92 101anti-parallel
Strand 4
A
32 39anti-parallel
Strand 5
A
46 51anti-parallel
Strand 6
A
58 60anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 136first strand
Strand 2
A
147 157anti-parallel
Strand 3
A
188 197anti-parallel
Strand 4
A
176 177anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 136first strand
Strand 2
A
147 157anti-parallel
Strand 3
A
188 197anti-parallel
Strand 4
A
181 182anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 166first strand
Strand 2
A
207 212anti-parallel
Strand 3
A
217 222anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
75 80anti-parallel
Strand 4
B
67 72anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
107 111parallel
Strand 3
B
89 95anti-parallel
Strand 4
B
38 43anti-parallel
Strand 5
B
50 54anti-parallel
Strand 6
B
58 59anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
107 111parallel
Strand 3
B
89 95anti-parallel
Strand 4
B
102 103anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 123first strand
Strand 2
B
134 144anti-parallel
Strand 3
B
178 187anti-parallel
Strand 4
B
164 168anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
150 155anti-parallel
Strand 3
B
196 203anti-parallel
Strand 4
B
206 213anti-parallel
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