Analysis of interatomic Contacts of Structural Units in PDB entry:
6WGE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WGE entry

There are 6 chains in PDB entry 6WGE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ASP 1225
B
 MET 1GLY 1217
C
 LYS 10ILE 630
E
 MET 1193LEU 2628
F
 A 1 A 43
G
 T 1 T 43
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 97 helices in PDB entry 6WGE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 49Right-handed alpha
Helix 2
AA2
A
52 57Right-handed 310
Helix 3
AA3
A
113 125Right-handed alpha
Helix 4
AA4
A
138 145Right-handed alpha
Helix 5
AA5
A
147 159Right-handed alpha
Helix 6
AA6
A
164 199Right-handed alpha
Helix 7
AA7
A
1035 1089Right-handed alpha
Helix 8
AA8
A
1105 1109Right-handed 310
Helix 9
AA9
A
1129 1148Right-handed alpha
Helix 10
AB1
A
1163 1179Right-handed alpha
Helix 11
AB2
A
1190 1195Right-handed alpha
Helix 12
AB3
B
38 50Right-handed alpha
Helix 13
AB4
B
51 54Right-handed 310
Helix 14
AB5
B
57 63Right-handed alpha
Helix 15
AB6
B
119 129Right-handed alpha
Helix 16
AB7
B
144 148Right-handed 310
Helix 17
AB8
B
151 164Right-handed alpha
Helix 18
AB9
B
166 236Right-handed alpha
Helix 19
AC1
B
935 947Right-handed alpha
Helix 20
AC2
B
963 979Right-handed alpha
Helix 21
AC3
B
985 1048Right-handed alpha
Helix 22
AC4
B
1116 1135Right-handed alpha
Helix 23
AC5
B
1144 1148Right-handed 310
Helix 24
AC6
B
1150 1165Right-handed alpha
Helix 25
AC7
B
1176 1182Right-handed 310
Helix 26
AC8
B
1202 1211Right-handed alpha
Helix 27
AC9
C
14 23Right-handed alpha
Helix 28
AD1
C
28 35Right-handed alpha
Helix 29
AD2
C
37 46Right-handed alpha
Helix 30
AD3
C
52 86Right-handed alpha
Helix 31
AD4
C
559 572Right-handed alpha
Helix 32
AD5
C
581 585Right-handed alpha
Helix 33
AD6
C
589 606Right-handed alpha
Helix 34
AD7
E
1198 1216Right-handed alpha
Helix 35
AD8
E
1234 1247Right-handed alpha
Helix 36
AD9
E
1248 1253Right-handed alpha
Helix 37
AE1
E
1257 1273Right-handed alpha
Helix 38
AE2
E
1294 1319Right-handed alpha
Helix 39
AE3
E
1329 1353Right-handed alpha
Helix 40
AE4
E
1381 1404Right-handed alpha
Helix 41
AE5
E
1407 1420Right-handed alpha
Helix 42
AE6
E
1421 1424Right-handed 310
Helix 43
AE7
E
1427 1445Right-handed alpha
Helix 44
AE8
E
1448 1458Right-handed alpha
Helix 45
AE9
E
1489 1501Right-handed alpha
Helix 46
AF1
E
1525 1551Right-handed alpha
Helix 47
AF2
E
1558 1572Right-handed alpha
Helix 48
AF3
E
1580 1597Right-handed alpha
Helix 49
AF4
E
1603 1628Right-handed alpha
Helix 50
AF5
E
1647 1666Right-handed alpha
Helix 51
AF6
E
1668 1690Right-handed alpha
Helix 52
AF7
E
1709 1728Right-handed alpha
Helix 53
AF8
E
1749 1764Right-handed alpha
Helix 54
AF9
E
1766 1768Right-handed 310
Helix 55
AG1
E
1769 1781Right-handed alpha
Helix 56
AG2
E
1785 1803Right-handed alpha
Helix 57
AG3
E
1809 1821Right-handed alpha
Helix 58
AG4
E
1824 1842Right-handed alpha
Helix 59
AG5
E
1849 1855Right-handed alpha
Helix 60
AG6
E
1856 1858Right-handed 310
Helix 61
AG7
E
1862 1879Right-handed alpha
Helix 62
AG8
E
1884 1895Right-handed alpha
Helix 63
AG9
E
1896 1898Right-handed 310
Helix 64
AH1
E
1900 1914Right-handed alpha
Helix 65
AH2
E
1922 1941Right-handed alpha
Helix 66
AH3
E
1945 1958Right-handed alpha
Helix 67
AH4
E
1965 1986Right-handed alpha
Helix 68
AH5
E
1999 2016Right-handed alpha
Helix 69
AH6
E
2017 2021Right-handed 310
Helix 70
AH7
E
2023 2033Right-handed alpha
Helix 71
AH8
E
2037 2055Right-handed alpha
Helix 72
AH9
E
2056 2058Right-handed 310
Helix 73
AI1
E
2062 2078Right-handed alpha
Helix 74
AI2
E
2081 2099Right-handed alpha
Helix 75
AI3
E
2102 2126Right-handed alpha
Helix 76
AI4
E
2132 2154Right-handed alpha
Helix 77
AI5
E
2158 2163Right-handed alpha
Helix 78
AI6
E
2168 2182Right-handed alpha
Helix 79
AI7
E
2186 2203Right-handed alpha
Helix 80
AI8
E
2204 2208Right-handed 310
Helix 81
AI9
E
2209 2220Right-handed alpha
Helix 82
AJ1
E
2227 2253Right-handed alpha
Helix 83
AJ2
E
2258 2262Right-handed 310
Helix 84
AJ3
E
2273 2289Right-handed alpha
Helix 85
AJ4
E
2295 2310Right-handed alpha
Helix 86
AJ5
E
2320 2326Right-handed alpha
Helix 87
AJ6
E
2331 2349Right-handed alpha
Helix 88
AJ7
E
2351 2356Right-handed alpha
Helix 89
AJ8
E
2357 2372Right-handed alpha
Helix 90
AJ9
E
2392 2400Right-handed alpha
Helix 91
AK1
E
2402 2418Right-handed alpha
Helix 92
AK2
E
2424 2438Right-handed alpha
Helix 93
AK3
E
2443 2471Right-handed alpha
Helix 94
AK4
E
2534 2558Right-handed alpha
Helix 95
AK5
E
2560 2567Right-handed alpha
Helix 96
AK6
E
2588 2601Right-handed alpha
Helix 97
AK7
E
2607 2626Right-handed alpha
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There are 10 sheets in PDB entry 6WGE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
3 10anti-parallel
Strand 3
A
79 86anti-parallel
Strand 4
A
90 92anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
3 10anti-parallel
Strand 3
A
79 86anti-parallel
Strand 4
A
94 99anti-parallel
Strand 5
A
102 107anti-parallel
Strand 6
A
111 112anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
1183 1187parallel
Strand 3
A
1152 1156parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1096 1100first strand
Strand 2
A
1111 1115anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1199 1206first strand
Strand 2
A
1212 1219anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
3 9anti-parallel
Strand 3
B
76 82anti-parallel
Strand 4
B
96 102anti-parallel
Strand 5
B
107 111anti-parallel
Strand 6
B
114 115anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 30first strand
Strand 2
B
1169 1173parallel
Strand 3
B
1139 1142parallel
Strand 4
B
138 139parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1052 1057first strand
Strand 2
B
1096 1101anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1188 1192first strand
Strand 2
B
1195 1199anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
579 580first strand
Strand 2
C
621 624anti-parallel
Strand 3
C
609 612anti-parallel
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