Analysis of interatomic Contacts of Structural Units in PDB entry:
6WGF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WGF entry

There are 6 chains in PDB entry 6WGF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
2	PRO 201	PHE 828
7	LYS 59	GLN 729
6	VAL 103	SER 834
5	THR 25	VAL 775
4	LEU 177	ARG 928
3	VAL 20	LEU 738

There are125 helices in PDB entry 6WGF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	2	203	216	Right-handed alpha
Helix 2	AA2	2	225	237	Right-handed alpha
Helix 3	AA3	2	246	253	Right-handed alpha
Helix 4	AA4	2	253	263	Right-handed alpha
Helix 5	AA5	2	263	283	Right-handed alpha
Helix 6	AA6	2	310	314	Right-handed 310
Helix 7	AA7	2	477	490	Right-handed alpha
Helix 8	AA8	2	492	502	Right-handed alpha
Helix 9	AA9	2	508	521	Right-handed alpha
Helix 10	AB1	2	549	560	Right-handed alpha
Helix 11	AB2	2	584	587	Right-handed 310
Helix 12	AB3	2	614	626	Right-handed alpha
Helix 13	AB4	2	662	667	Right-handed alpha
Helix 14	AB5	2	670	675	Right-handed alpha
Helix 15	AB6	2	688	705	Right-handed alpha
Helix 16	AB7	2	759	772	Right-handed alpha
Helix 17	AB8	2	809	825	Right-handed alpha
Helix 18	AB9	7	61	72	Right-handed alpha
Helix 19	AC1	7	81	95	Right-handed alpha
Helix 20	AC2	7	102	107	Right-handed alpha
Helix 21	AC3	7	109	123	Right-handed alpha
Helix 22	AC4	7	209	214	Right-handed alpha
Helix 23	AC5	7	336	340	Right-handed 310
Helix 24	AC6	7	397	406	Right-handed alpha
Helix 25	AC7	7	409	418	Right-handed alpha
Helix 26	AC8	7	425	437	Right-handed alpha
Helix 27	AC9	7	466	477	Right-handed alpha
Helix 28	AD1	7	525	529	Right-handed 310
Helix 29	AD2	7	530	543	Right-handed alpha
Helix 30	AD3	7	579	584	Right-handed alpha
Helix 31	AD4	7	587	594	Right-handed alpha
Helix 32	AD5	7	607	622	Right-handed alpha
Helix 33	AD6	7	634	646	Right-handed alpha
Helix 34	AD7	7	656	672	Right-handed alpha
Helix 35	AD8	7	685	703	Right-handed alpha
Helix 36	AD9	7	709	723	Right-handed alpha
Helix 37	AE1	7	724	729	Right-handed 310
Helix 38	AE2	6	106	121	Right-handed alpha
Helix 39	AE3	6	135	147	Right-handed alpha
Helix 40	AE4	6	155	159	Right-handed alpha
Helix 41	AE5	6	160	163	Right-handed 310
Helix 42	AE6	6	164	171	Right-handed alpha
Helix 43	AE7	6	173	193	Right-handed alpha
Helix 44	AE8	6	280	284	Right-handed 310
Helix 45	AE9	6	512	520	Right-handed alpha
Helix 46	AF1	6	524	530	Right-handed alpha
Helix 47	AF2	6	540	551	Right-handed alpha
Helix 48	AF3	6	580	592	Right-handed alpha
Helix 49	AF4	6	604	609	Right-handed alpha
Helix 50	AF5	6	640	644	Right-handed 310
Helix 51	AF6	6	645	658	Right-handed alpha
Helix 52	AF7	6	694	700	Right-handed alpha
Helix 53	AF8	6	702	707	Right-handed alpha
Helix 54	AF9	6	720	735	Right-handed alpha
Helix 55	AG1	6	750	760	Right-handed alpha
Helix 56	AG2	6	766	782	Right-handed alpha
Helix 57	AG3	6	796	814	Right-handed alpha
Helix 58	AG4	6	820	834	Right-handed alpha
Helix 59	AG5	5	26	38	Right-handed alpha
Helix 60	AG6	5	46	55	Right-handed alpha
Helix 61	AG7	5	65	72	Right-handed alpha
Helix 62	AG8	5	72	82	Right-handed alpha
Helix 63	AG9	5	82	107	Right-handed alpha
Helix 64	AH1	5	245	248	Right-handed 310
Helix 65	AH2	5	279	283	Right-handed 310
Helix 66	AH3	5	351	362	Right-handed alpha
Helix 67	AH4	5	365	375	Right-handed alpha
Helix 68	AH5	5	381	390	Right-handed alpha
Helix 69	AH6	5	424	433	Right-handed alpha
Helix 70	AH7	5	486	500	Right-handed alpha
Helix 71	AH8	5	542	548	Right-handed alpha
Helix 72	AH9	5	596	610	Right-handed alpha
Helix 73	AI1	5	615	639	Right-handed alpha
Helix 74	AI2	5	649	666	Right-handed alpha
Helix 75	AI3	5	673	693	Right-handed alpha
Helix 76	AI4	5	708	722	Right-handed alpha
Helix 77	AI5	5	729	740	Right-handed alpha
Helix 78	AI6	5	744	758	Right-handed alpha
Helix 79	AI7	5	760	769	Right-handed alpha
Helix 80	AI8	5	769	774	Right-handed alpha
Helix 81	AI9	4	186	200	Right-handed alpha
Helix 82	AJ1	4	203	209	Right-handed alpha
Helix 83	AJ2	4	226	234	Right-handed alpha
Helix 84	AJ3	4	244	251	Right-handed alpha
Helix 85	AJ4	4	254	262	Right-handed alpha
Helix 86	AJ5	4	264	285	Right-handed alpha
Helix 87	AJ6	4	293	297	Right-handed alpha
Helix 88	AJ7	4	502	513	Right-handed alpha
Helix 89	AJ8	4	517	526	Right-handed alpha
Helix 90	AJ9	4	533	546	Right-handed alpha
Helix 91	AK1	4	573	581	Right-handed alpha
Helix 92	AK2	4	594	596	Right-handed 310
Helix 93	AK3	4	597	602	Right-handed alpha
Helix 94	AK4	4	619	624	Right-handed alpha
Helix 95	AK5	4	641	649	Right-handed alpha
Helix 96	AK6	4	687	692	Right-handed alpha
Helix 97	AK7	4	695	701	Right-handed alpha
Helix 98	AK8	4	716	726	Right-handed alpha
Helix 99	AK9	4	747	758	Right-handed alpha
Helix 100	AL1	4	763	766	Right-handed 310
Helix 101	AL2	4	767	779	Right-handed alpha
Helix 102	AL3	4	796	811	Right-handed alpha
Helix 103	AL4	4	819	832	Right-handed alpha
Helix 104	AL5	4	860	876	Right-handed alpha
Helix 105	AL6	4	882	893	Right-handed alpha
Helix 106	AL7	4	899	913	Right-handed alpha
Helix 107	AL8	3	21	35	Right-handed alpha
Helix 108	AL9	3	38	56	Right-handed alpha
Helix 109	AM1	3	100	105	Right-handed alpha
Helix 110	AM2	3	107	117	Right-handed alpha
Helix 111	AM3	3	117	136	Right-handed alpha
Helix 112	AM4	3	345	353	Right-handed alpha
Helix 113	AM5	3	358	366	Right-handed alpha
Helix 114	AM6	3	374	387	Right-handed alpha
Helix 115	AM7	3	414	426	Right-handed alpha
Helix 116	AM8	3	475	478	Right-handed 310
Helix 117	AM9	3	479	489	Right-handed alpha
Helix 118	AN1	3	536	543	Right-handed alpha
Helix 119	AN2	3	556	559	Right-handed 310
Helix 120	AN3	3	560	567	Right-handed alpha
Helix 121	AN4	3	652	666	Right-handed alpha
Helix 122	AN5	3	676	687	Right-handed alpha
Helix 123	AN6	3	690	694	Right-handed alpha
Helix 124	AN7	3	699	716	Right-handed alpha
Helix 125	AN8	3	722	738	Right-handed alpha

There are 39 sheets in PDB entry 6WGF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	241	245	first strand
Strand 2	2	294	298	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	303	304	first strand
Strand 2	2	317	325	parallel
Strand 3	2	423	429	anti-parallel
Strand 4	2	451	457	anti-parallel
Strand 5	2	405	409	parallel
Strand 6	2	388	391	anti-parallel
Strand 7	2	317	325	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	351	352	first strand
Strand 2	2	333	337	anti-parallel
Strand 3	2	381	383	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	339	341	first strand
Strand 2	2	373	375	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	563	566	first strand
Strand 2	2	603	606	parallel
Strand 3	2	645	649	parallel
Strand 4	2	539	542	parallel
Strand 5	2	679	682	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	579	583	first strand
Strand 2	2	588	592	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	628	633	first strand
Strand 2	2	636	641	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	77	80	first strand
Strand 2	7	201	204	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	224	225	first strand
Strand 2	7	239	248	parallel
Strand 3	7	299	316	anti-parallel
Strand 4	7	252	261	anti-parallel
Strand 5	7	269	272	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	224	225	first strand
Strand 2	7	239	248	parallel
Strand 3	7	348	354	anti-parallel
Strand 4	7	377	383	anti-parallel
Strand 5	7	330	335	parallel
Strand 6	7	299	316	anti-parallel
Strand 7	7	252	261	anti-parallel
Strand 8	7	269	272	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	519	523	first strand
Strand 2	7	561	567	parallel
Strand 3	7	456	460	parallel
Strand 4	7	596	600	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	496	499	first strand
Strand 2	7	506	509	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	545	547	first strand
Strand 2	7	556	558	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	651	652	first strand
Strand 2	7	707	708	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	152	154	first strand
Strand 2	6	266	268	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	301	303	first strand
Strand 2	6	354	362	anti-parallel
Strand 3	6	287	298	anti-parallel
Strand 4	6	622	625	anti-parallel
Strand 5	6	610	612	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	301	303	first strand
Strand 2	6	354	362	anti-parallel
Strand 3	6	376	381	anti-parallel
Strand 4	6	454	458	parallel
Strand 5	6	394	400	anti-parallel
Strand 6	6	287	298	anti-parallel
Strand 7	6	622	625	anti-parallel
Strand 8	6	610	612	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	309	310	first strand
Strand 2	6	345	346	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	403	404	first strand
Strand 2	6	451	452	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	595	598	first strand
Strand 2	6	635	638	parallel
Strand 3	6	677	681	parallel
Strand 4	6	571	575	parallel
Strand 5	6	711	715	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	660	665	first strand
Strand 2	6	668	673	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	62	64	first strand
Strand 2	5	138	140	parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	173	175	first strand
Strand 2	5	251	259	anti-parallel
Strand 3	5	273	278	anti-parallel
Strand 4	5	326	335	parallel
Strand 5	5	291	300	anti-parallel
Strand 6	5	159	169	anti-parallel
Strand 7	5	251	259	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	189	193	first strand
Strand 2	5	178	183	anti-parallel
Strand 3	5	241	244	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	411	415	first strand
Strand 2	5	517	523	parallel
Strand 3	5	475	478	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	452	455	first strand
Strand 2	5	462	466	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	501	503	first strand
Strand 2	5	512	514	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	240	243	first strand
Strand 2	4	302	305	parallel

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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	356	359	first strand
Strand 2	4	339	347	anti-parallel
Strand 3	4	390	400	anti-parallel
Strand 4	4	414	420	anti-parallel
Strand 5	4	460	467	parallel
Strand 6	4	432	440	anti-parallel
Strand 7	4	325	335	anti-parallel
Strand 8	4	390	400	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	550	551	first strand
Strand 2	4	557	558	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	590	592	first strand
Strand 2	4	628	632	parallel
Strand 3	4	670	674	parallel
Strand 4	4	564	567	parallel
Strand 5	4	704	707	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	604	607	first strand
Strand 2	4	614	617	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	653	658	first strand
Strand 2	4	661	666	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	95	99	first strand
Strand 2	3	154	158	parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	193	196	first strand
Strand 2	3	250	259	anti-parallel
Strand 3	3	179	189	anti-parallel
Strand 4	3	291	299	anti-parallel
Strand 5	3	325	329	anti-parallel

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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	193	196	first strand
Strand 2	3	250	259	anti-parallel
Strand 3	3	274	278	anti-parallel
Strand 4	3	320	321	parallel
Strand 5	3	291	299	anti-parallel
Strand 6	3	325	329	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	208	213	first strand
Strand 2	3	198	203	anti-parallel
Strand 3	3	242	243	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	429	432	first strand
Strand 2	3	469	473	parallel
Strand 3	3	511	515	parallel
Strand 4	3	405	409	parallel
Strand 5	3	545	549	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	494	496	first strand
Strand 2	3	505	507	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WGF

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WGF