Analysis of interatomic Contacts of Structural Units in PDB entry:
6WGM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WGM entry

There is 1 chain in PDB entry 6WGM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 20MET 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6WGM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 52Right-handed alpha
Helix 2
AA2
A
68 70Right-handed 310
Helix 3
AA3
A
71 78Right-handed alpha
Helix 4
AA4
A
88 92Right-handed 310
Helix 5
AA5
A
96 103Right-handed 310
Helix 6
AA6
A
109 131Right-handed alpha
Helix 7
AA7
A
154 158Right-handed 310
Helix 8
AA8
A
167 177Right-handed alpha
Helix 9
AA9
A
185 187Right-handed 310
Helix 10
AB1
A
188 195Right-handed alpha
Helix 11
AB2
A
205 211Right-handed alpha
Helix 12
AB3
A
213 216Right-handed 310
Helix 13
AB4
A
236 241Right-handed alpha
Helix 14
AB5
A
246 279Right-handed alpha
Helix 15
AB6
A
287 307Right-handed alpha
Helix 16
AB7
A
311 322Right-handed alpha
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There are 3 sheets in PDB entry 6WGM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 28first strand
Strand 2
A
56 61parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
229 235anti-parallel
Strand 3
A
133 140anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 183first strand
Strand 2
A
162 165parallel
Strand 3
A
200 203parallel
Strand 4
A
145 148anti-parallel
Strand 5
A
219 221anti-parallel
Strand 6
A
282 284parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il