Analysis of interatomic Contacts of Structural Units in PDB entry:
6WGT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WGT entry

There are 3 chains in PDB entry 6WGT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 72TYR 399
B
 HIS 70LYS 400
C
 LEU 69LYS 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6WGT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 79Right-handed alpha
Helix 2
AA2
A
79 102Right-handed alpha
Helix 3
AA3
A
107 138Right-handed alpha
Helix 4
AA4
A
144 146Right-handed 310
Helix 5
AA5
A
147 179Right-handed alpha
Helix 6
AA6
A
189 208Right-handed alpha
Helix 7
AA7
A
208 213Right-handed alpha
Helix 8
AA8
A
231 243Right-handed alpha
Helix 9
AA9
A
243 1019Right-handed alpha
Helix 10
AB1
A
1022 1044Right-handed alpha
Helix 11
AB2
A
1054 1075Right-handed alpha
Helix 12
AB3
A
1087 1092Right-handed alpha
Helix 13
AB4
A
1097 349Right-handed alpha
Helix 14
AB5
A
354 371Right-handed alpha
Helix 15
AB6
A
374 384Right-handed alpha
Helix 16
AB7
A
384 396Right-handed alpha
Helix 17
AB8
B
71 102Right-handed alpha
Helix 18
AB9
B
103 106Right-handed 310
Helix 19
AC1
B
107 127Right-handed alpha
Helix 20
AC2
B
127 137Right-handed alpha
Helix 21
AC3
B
146 179Right-handed alpha
Helix 22
AC4
B
188 207Right-handed alpha
Helix 23
AC5
B
208 216Right-handed alpha
Helix 24
AC6
B
231 242Right-handed alpha
Helix 25
AC7
B
243 1019Right-handed alpha
Helix 26
AC8
B
1023 1042Right-handed alpha
Helix 27
AC9
B
1057 1075Right-handed alpha
Helix 28
AD1
B
1088 1095Right-handed alpha
Helix 29
AD2
B
1102 349Right-handed alpha
Helix 30
AD3
B
354 371Right-handed alpha
Helix 31
AD4
B
371 384Right-handed alpha
Helix 32
AD5
B
384 396Right-handed alpha
Helix 33
AD6
C
70 102Right-handed alpha
Helix 34
AD7
C
107 127Right-handed alpha
Helix 35
AD8
C
127 137Right-handed alpha
Helix 36
AD9
C
144 174Right-handed alpha
Helix 37
AE1
C
184 208Right-handed alpha
Helix 38
AE2
C
208 213Right-handed alpha
Helix 39
AE3
C
231 242Right-handed alpha
Helix 40
AE4
C
243 1019Right-handed alpha
Helix 41
AE5
C
1022 1043Right-handed alpha
Helix 42
AE6
C
1055 1059Right-handed alpha
Helix 43
AE7
C
1059 1065Right-handed alpha
Helix 44
AE8
C
1066 1071Right-handed alpha
Helix 45
AE9
C
1071 1077Right-handed alpha
Helix 46
AF1
C
1084 1096Right-handed alpha
Helix 47
AF2
C
1097 346Right-handed alpha
Helix 48
AF3
C
354 371Right-handed alpha
Helix 49
AF4
C
374 384Right-handed alpha
Helix 50
AF5
C
384 395Right-handed alpha
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There are 3 sheets in PDB entry 6WGT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
226 227anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 223first strand
Strand 2
B
226 227anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
222 223first strand
Strand 2
C
226 227anti-parallel
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