Analysis of interatomic Contacts of Structural Units in PDB entry:
6WGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WGW entry

There are 2 chains in PDB entry 6WGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 10GLN 417
B
 LYS 11GLN 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 6WGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 25Right-handed 310
Helix 2
AA2
A
35 38Right-handed 310
Helix 3
AA3
A
39 48Right-handed alpha
Helix 4
AA4
A
69 78Right-handed alpha
Helix 5
AA5
A
91 98Right-handed alpha
Helix 6
AA6
A
109 122Right-handed alpha
Helix 7
AA7
A
122 128Right-handed alpha
Helix 8
AA8
A
129 143Right-handed alpha
Helix 9
AA9
A
152 156Right-handed alpha
Helix 10
AB1
A
159 170Right-handed alpha
Helix 11
AB2
A
172 174Right-handed 310
Helix 12
AB3
A
175 188Right-handed alpha
Helix 13
AB4
A
193 220Right-handed alpha
Helix 14
AB5
A
226 233Right-handed alpha
Helix 15
AB6
A
242 259Right-handed alpha
Helix 16
AB7
A
260 275Right-handed alpha
Helix 17
AB8
A
275 285Right-handed alpha
Helix 18
AB9
A
285 300Right-handed alpha
Helix 19
AC1
A
330 335Right-handed alpha
Helix 20
AC2
A
360 364Right-handed 310
Helix 21
AC3
A
367 386Right-handed alpha
Helix 22
AC4
B
21 25Right-handed 310
Helix 23
AC5
B
35 38Right-handed 310
Helix 24
AC6
B
39 48Right-handed alpha
Helix 25
AC7
B
69 78Right-handed alpha
Helix 26
AC8
B
91 98Right-handed alpha
Helix 27
AC9
B
109 122Right-handed alpha
Helix 28
AD1
B
122 128Right-handed alpha
Helix 29
AD2
B
129 143Right-handed alpha
Helix 30
AD3
B
144 147Right-handed 310
Helix 31
AD4
B
152 156Right-handed alpha
Helix 32
AD5
B
159 169Right-handed alpha
Helix 33
AD6
B
172 174Right-handed 310
Helix 34
AD7
B
175 188Right-handed alpha
Helix 35
AD8
B
193 220Right-handed alpha
Helix 36
AD9
B
226 233Right-handed alpha
Helix 37
AE1
B
242 259Right-handed alpha
Helix 38
AE2
B
260 274Right-handed alpha
Helix 39
AE3
B
275 285Right-handed alpha
Helix 40
AE4
B
285 300Right-handed alpha
Helix 41
AE5
B
330 335Right-handed alpha
Helix 42
AE6
B
360 364Right-handed 310
Helix 43
AE7
B
367 386Right-handed alpha
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There are 8 sheets in PDB entry 6WGW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
64 67anti-parallel
Strand 3
A
325 329parallel
Strand 4
A
304 309anti-parallel
Strand 5
A
83 84anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 151first strand
Strand 2
A
411 413anti-parallel
Strand 3
A
390 391anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 315first strand
Strand 2
A
318 320anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 400first strand
Strand 2
A
406 408anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
64 67anti-parallel
Strand 3
B
325 329parallel
Strand 4
B
304 309anti-parallel
Strand 5
B
83 84anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 151first strand
Strand 2
B
411 413anti-parallel
Strand 3
B
390 391anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
313 315first strand
Strand 2
B
318 320anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
398 400first strand
Strand 2
B
406 408anti-parallel
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