Analysis of interatomic Contacts of Structural Units in PDB entry:
6WH4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WH4 entry

There are 3 chains in PDB entry 6WH4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 71TYR 399
B
 LEU 69LYS 400
C
 LEU 69GLN 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 51 helices in PDB entry 6WH4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 74Right-handed 310
Helix 2
AA2
A
75 102Right-handed alpha
Helix 3
AA3
A
103 106Right-handed 310
Helix 4
AA4
A
107 127Right-handed alpha
Helix 5
AA5
A
128 138Right-handed alpha
Helix 6
AA6
A
144 146Right-handed 310
Helix 7
AA7
A
147 178Right-handed alpha
Helix 8
AA8
A
190 207Right-handed alpha
Helix 9
AA9
A
208 213Right-handed alpha
Helix 10
AB1
A
231 243Right-handed alpha
Helix 11
AB2
A
243 1020Right-handed alpha
Helix 12
AB3
A
1024 1042Right-handed alpha
Helix 13
AB4
A
1054 1079Right-handed alpha
Helix 14
AB5
A
1086 1092Right-handed alpha
Helix 15
AB6
A
1097 349Right-handed alpha
Helix 16
AB7
A
354 371Right-handed alpha
Helix 17
AB8
A
371 384Right-handed alpha
Helix 18
AB9
A
384 396Right-handed alpha
Helix 19
AC1
B
72 102Right-handed alpha
Helix 20
AC2
B
107 127Right-handed alpha
Helix 21
AC3
B
127 137Right-handed alpha
Helix 22
AC4
B
144 146Right-handed 310
Helix 23
AC5
B
147 176Right-handed alpha
Helix 24
AC6
B
189 207Right-handed alpha
Helix 25
AC7
B
208 216Right-handed alpha
Helix 26
AC8
B
231 243Right-handed alpha
Helix 27
AC9
B
243 1019Right-handed alpha
Helix 28
AD1
B
1023 1042Right-handed alpha
Helix 29
AD2
B
1056 1075Right-handed alpha
Helix 30
AD3
B
1088 1095Right-handed alpha
Helix 31
AD4
B
1102 349Right-handed alpha
Helix 32
AD5
B
354 371Right-handed alpha
Helix 33
AD6
B
371 384Right-handed alpha
Helix 34
AD7
B
384 396Right-handed alpha
Helix 35
AD8
C
70 102Right-handed alpha
Helix 36
AD9
C
107 125Right-handed alpha
Helix 37
AE1
C
127 137Right-handed alpha
Helix 38
AE2
C
144 147Right-handed 310
Helix 39
AE3
C
148 175Right-handed alpha
Helix 40
AE4
C
184 208Right-handed alpha
Helix 41
AE5
C
208 213Right-handed alpha
Helix 42
AE6
C
231 243Right-handed alpha
Helix 43
AE7
C
243 1018Right-handed alpha
Helix 44
AE8
C
1022 1042Right-handed alpha
Helix 45
AE9
C
1055 1059Right-handed alpha
Helix 46
AF1
C
1061 1078Right-handed alpha
Helix 47
AF2
C
1084 1096Right-handed alpha
Helix 48
AF3
C
1097 349Right-handed alpha
Helix 49
AF4
C
354 371Right-handed alpha
Helix 50
AF5
C
374 384Right-handed alpha
Helix 51
AF6
C
384 397Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 6WH4.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
222 223first strand
Strand 2
C
226 227anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il