Analysis of interatomic Contacts of Structural Units in PDB entry:
6WH6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WH6 entry

There are 4 chains in PDB entry 6WH6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 41	LYS 200
A	ALA 202	LEU 447
B	ASN 42	LYS 200
B	ALA 202	HIS 446

There are 36 helices in PDB entry 6WH6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	52	67	Right-handed alpha
Helix 2	AA2	A	85	91	Right-handed alpha
Helix 3	AA3	A	96	98	Right-handed 310
Helix 4	AA4	A	103	107	Right-handed alpha
Helix 5	AA5	A	123	125	Right-handed 310
Helix 6	AA6	A	151	154	Right-handed 310
Helix 7	AA7	A	158	163	Right-handed 310
Helix 8	AA8	A	174	185	Right-handed alpha
Helix 9	AA9	A	203	219	Right-handed alpha
Helix 10	AB1	A	221	223	Right-handed 310
Helix 11	AB2	A	239	253	Right-handed alpha
Helix 12	AB3	A	268	270	Right-handed 310
Helix 13	AB4	A	301	306	Right-handed alpha
Helix 14	AB5	A	335	338	Right-handed 310
Helix 15	AB6	A	345	365	Right-handed alpha
Helix 16	AB7	A	411	429	Right-handed alpha
Helix 17	AB8	A	430	433	Right-handed 310
Helix 18	AB9	A	438	446	Right-handed alpha
Helix 19	AC1	B	52	67	Right-handed alpha
Helix 20	AC2	B	85	91	Right-handed alpha
Helix 21	AC3	B	96	98	Right-handed 310
Helix 22	AC4	B	103	107	Right-handed alpha
Helix 23	AC5	B	123	125	Right-handed 310
Helix 24	AC6	B	151	154	Right-handed 310
Helix 25	AC7	B	158	163	Right-handed 310
Helix 26	AC8	B	174	185	Right-handed alpha
Helix 27	AC9	B	203	219	Right-handed alpha
Helix 28	AD1	B	221	223	Right-handed 310
Helix 29	AD2	B	239	253	Right-handed alpha
Helix 30	AD3	B	268	270	Right-handed 310
Helix 31	AD4	B	301	306	Right-handed alpha
Helix 32	AD5	B	335	338	Right-handed 310
Helix 33	AD6	B	345	365	Right-handed alpha
Helix 34	AD7	B	411	420	Right-handed alpha
Helix 35	AD8	B	420	429	Right-handed alpha
Helix 36	AD9	B	438	445	Right-handed alpha

There are 14 sheets in PDB entry 6WH6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	114	first strand
Strand 2	A	71	74	parallel
Strand 3	A	42	49	parallel
Strand 4	A	134	143	parallel
Strand 5	A	127	130	anti-parallel
Strand 6	A	118	122	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	114	first strand
Strand 2	A	71	74	parallel
Strand 3	A	42	49	parallel
Strand 4	A	134	143	parallel
Strand 5	A	331	333	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	81	first strand
Strand 2	A	100	102	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	149	first strand
Strand 2	A	298	299	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	167	first strand
Strand 2	A	291	293	parallel
Strand 3	A	188	194	parallel
Strand 4	A	225	231	parallel
Strand 5	A	256	258	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	267	first strand
Strand 2	A	272	277	anti-parallel
Strand 3	A	284	288	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	384	first strand
Strand 2	A	387	393	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	114	first strand
Strand 2	B	71	74	parallel
Strand 3	B	43	49	parallel
Strand 4	B	135	143	parallel
Strand 5	B	127	130	anti-parallel
Strand 6	B	118	122	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	114	first strand
Strand 2	B	71	74	parallel
Strand 3	B	43	49	parallel
Strand 4	B	135	143	parallel
Strand 5	B	331	333	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	81	first strand
Strand 2	B	100	102	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	149	first strand
Strand 2	B	298	299	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	167	first strand
Strand 2	B	291	293	parallel
Strand 3	B	188	194	parallel
Strand 4	B	225	231	parallel
Strand 5	B	256	258	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	267	first strand
Strand 2	B	272	277	anti-parallel
Strand 3	B	284	288	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	384	first strand
Strand 2	B	387	393	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WH6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WH6