Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WHI entry

There are 16 chains in PDB entry 6WHI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	ASP 434
B	VAL 3	VAL 322
C	LEU 25	GLU 357
D	ILE 24	GLU 357
E	ILE 24	ALA 358
F	ILE 24	ALA 358
G	LEU 25	GLU 357
H	LEU 25	GLY 356
M	C 1	G 60
L	MET 1	PHE 187
I	SER 3	GLU 66
J	SER 3	GLU 66
N	A 3	C 17
Q	G 1	G 10
P	C 108	C 117
O	G 101	T 115

There are 89 helices in PDB entry 6WHI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	29	Right-handed alpha
Helix 2	AA2	A	35	40	Right-handed alpha
Helix 3	AA3	A	40	45	Right-handed alpha
Helix 4	AA4	A	46	49	Right-handed 310
Helix 5	AA5	A	50	60	Right-handed alpha
Helix 6	AA6	A	70	74	Right-handed 310
Helix 7	AA7	A	98	100	Right-handed 310
Helix 8	AA8	A	115	123	Right-handed alpha
Helix 9	AA9	A	124	126	Right-handed 310
Helix 10	AB1	A	129	134	Right-handed alpha
Helix 11	AB2	A	137	144	Right-handed alpha
Helix 12	AB3	A	151	162	Right-handed alpha
Helix 13	AB4	A	196	211	Right-handed alpha
Helix 14	AB5	A	212	225	Right-handed alpha
Helix 15	AB6	A	252	258	Right-handed alpha
Helix 16	AB7	A	294	309	Right-handed alpha
Helix 17	AB8	A	311	313	Right-handed 310
Helix 18	AB9	A	314	342	Right-handed alpha
Helix 19	AC1	A	356	363	Right-handed alpha
Helix 20	AC2	A	386	399	Right-handed alpha
Helix 21	AC3	A	408	430	Right-handed alpha
Helix 22	AC4	B	33	53	Right-handed alpha
Helix 23	AC5	B	115	121	Right-handed 310
Helix 24	AC6	B	122	137	Right-handed alpha
Helix 25	AC7	B	165	181	Right-handed alpha
Helix 26	AC8	B	190	200	Right-handed alpha
Helix 27	AC9	B	206	215	Right-handed alpha
Helix 28	AD1	B	297	301	Right-handed 310
Helix 29	AD2	B	318	322	Right-handed 310
Helix 30	AD3	C	48	55	Right-handed 310
Helix 31	AD4	C	130	148	Right-handed alpha
Helix 32	AD5	C	150	163	Right-handed alpha
Helix 33	AD6	C	208	224	Right-handed alpha
Helix 34	AD7	C	275	284	Right-handed alpha
Helix 35	AD8	C	302	306	Right-handed 310
Helix 36	AD9	C	322	333	Right-handed alpha
Helix 37	AE1	C	338	352	Right-handed alpha
Helix 38	AE2	D	48	52	Right-handed 310
Helix 39	AE3	D	82	91	Right-handed alpha
Helix 40	AE4	D	130	148	Right-handed alpha
Helix 41	AE5	D	150	163	Right-handed alpha
Helix 42	AE6	D	208	224	Right-handed alpha
Helix 43	AE7	D	275	284	Right-handed alpha
Helix 44	AE8	D	302	306	Right-handed 310
Helix 45	AE9	D	322	333	Right-handed alpha
Helix 46	AF1	D	338	352	Right-handed alpha
Helix 47	AF2	E	49	54	Right-handed 310
Helix 48	AF3	E	82	92	Right-handed alpha
Helix 49	AF4	E	130	148	Right-handed alpha
Helix 50	AF5	E	150	163	Right-handed alpha
Helix 51	AF6	E	208	224	Right-handed alpha
Helix 52	AF7	E	275	284	Right-handed alpha
Helix 53	AF8	E	302	306	Right-handed 310
Helix 54	AF9	E	322	333	Right-handed alpha
Helix 55	AG1	E	338	352	Right-handed alpha
Helix 56	AG2	F	49	54	Right-handed 310
Helix 57	AG3	F	84	91	Right-handed alpha
Helix 58	AG4	F	130	148	Right-handed alpha
Helix 59	AG5	F	150	163	Right-handed alpha
Helix 60	AG6	F	208	224	Right-handed alpha
Helix 61	AG7	F	275	284	Right-handed alpha
Helix 62	AG8	F	302	306	Right-handed 310
Helix 63	AG9	F	322	333	Right-handed alpha
Helix 64	AH1	F	338	352	Right-handed alpha
Helix 65	AH2	G	49	54	Right-handed 310
Helix 66	AH3	G	82	92	Right-handed alpha
Helix 67	AH4	G	130	148	Right-handed alpha
Helix 68	AH5	G	150	163	Right-handed alpha
Helix 69	AH6	G	208	224	Right-handed alpha
Helix 70	AH7	G	275	284	Right-handed alpha
Helix 71	AH8	G	302	306	Right-handed 310
Helix 72	AH9	G	322	333	Right-handed alpha
Helix 73	AI1	G	338	352	Right-handed alpha
Helix 74	AI2	H	48	53	Right-handed alpha
Helix 75	AI3	H	82	92	Right-handed alpha
Helix 76	AI4	H	130	148	Right-handed alpha
Helix 77	AI5	H	150	163	Right-handed alpha
Helix 78	AI6	H	208	224	Right-handed alpha
Helix 79	AI7	H	275	284	Right-handed alpha
Helix 80	AI8	H	302	306	Right-handed 310
Helix 81	AI9	H	322	333	Right-handed alpha
Helix 82	AJ1	H	338	352	Right-handed alpha
Helix 83	AJ2	L	16	33	Right-handed alpha
Helix 84	AJ3	L	63	73	Right-handed alpha
Helix 85	AJ4	L	108	121	Right-handed alpha
Helix 86	AJ5	L	123	131	Right-handed alpha
Helix 87	AJ6	L	132	136	Right-handed 310
Helix 88	AJ7	I	26	37	Right-handed alpha
Helix 89	AJ8	J	26	37	Right-handed alpha

There are 41 sheets in PDB entry 6WHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	66	first strand
Strand 2	A	107	109	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	194	195	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	95	96	first strand
Strand 2	B	283	290	anti-parallel
Strand 3	B	184	188	anti-parallel
Strand 4	B	60	68	anti-parallel
Strand 5	B	103	113	anti-parallel
Strand 6	B	8	11	anti-parallel
Strand 7	B	157	160	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	145	first strand
Strand 2	B	15	18	anti-parallel
Strand 3	B	103	113	anti-parallel
Strand 4	B	60	68	anti-parallel
Strand 5	B	184	188	anti-parallel
Strand 6	B	283	290	anti-parallel
Strand 7	B	248	254	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	190	first strand
Strand 2	B	277	278	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	234	first strand
Strand 2	B	217	220	anti-parallel
Strand 3	B	240	241	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	A	262	267	parallel
Strand 3	A	239	241	anti-parallel
Strand 4	B	79	81	parallel
Strand 5	B	70	71	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	306	307	first strand
Strand 2	B	314	315	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	128	first strand
Strand 2	C	30	32	anti-parallel
Strand 3	C	354	356	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	39	first strand
Strand 2	C	109	118	anti-parallel
Strand 3	C	228	237	anti-parallel
Strand 4	C	177	185	anti-parallel
Strand 5	C	193	196	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	188	189	first strand
Strand 2	C	177	185	anti-parallel
Strand 3	C	228	237	anti-parallel
Strand 4	C	109	118	anti-parallel
Strand 5	C	42	47	anti-parallel
Strand 6	C	271	274	anti-parallel
Strand 7	C	267	268	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	249	first strand
Strand 2	C	264	265	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	128	first strand
Strand 2	D	30	32	anti-parallel
Strand 3	D	354	356	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	39	first strand
Strand 2	D	109	118	anti-parallel
Strand 3	D	228	237	anti-parallel
Strand 4	D	177	185	anti-parallel
Strand 5	D	193	196	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	188	189	first strand
Strand 2	D	177	185	anti-parallel
Strand 3	D	228	237	anti-parallel
Strand 4	D	109	118	anti-parallel
Strand 5	D	42	47	anti-parallel
Strand 6	D	271	274	anti-parallel
Strand 7	D	267	268	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	70	first strand
Strand 2	D	94	100	anti-parallel
Strand 3	D	261	265	parallel
Strand 4	D	248	249	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	127	128	first strand
Strand 2	E	31	32	anti-parallel
Strand 3	E	354	355	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	39	first strand
Strand 2	E	109	118	anti-parallel
Strand 3	E	228	237	anti-parallel
Strand 4	E	177	183	anti-parallel
Strand 5	E	193	196	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	39	first strand
Strand 2	E	109	118	anti-parallel
Strand 3	E	42	47	anti-parallel
Strand 4	E	271	274	anti-parallel
Strand 5	E	267	268	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	69	first strand
Strand 2	E	95	102	anti-parallel
Strand 3	E	243	244	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	69	first strand
Strand 2	E	95	102	anti-parallel
Strand 3	E	260	261	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	127	128	first strand
Strand 2	F	31	33	anti-parallel
Strand 3	F	353	355	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	38	39	first strand
Strand 2	F	109	118	anti-parallel
Strand 3	F	228	237	anti-parallel
Strand 4	F	177	183	anti-parallel
Strand 5	F	194	196	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	38	39	first strand
Strand 2	F	109	118	anti-parallel
Strand 3	F	42	47	anti-parallel
Strand 4	F	271	274	anti-parallel
Strand 5	F	267	268	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	70	first strand
Strand 2	F	94	102	anti-parallel
Strand 3	F	243	244	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	248	249	first strand
Strand 2	F	264	265	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	127	128	first strand
Strand 2	G	30	32	anti-parallel
Strand 3	G	354	356	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	38	39	first strand
Strand 2	G	109	118	anti-parallel
Strand 3	G	228	237	anti-parallel
Strand 4	G	177	185	anti-parallel
Strand 5	G	193	196	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	188	189	first strand
Strand 2	G	177	185	anti-parallel
Strand 3	G	228	237	anti-parallel
Strand 4	G	109	118	anti-parallel
Strand 5	G	42	47	anti-parallel
Strand 6	G	273	274	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	64	68	first strand
Strand 2	G	96	102	anti-parallel
Strand 3	G	243	244	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	64	68	first strand
Strand 2	G	96	102	anti-parallel
Strand 3	G	261	265	parallel
Strand 4	G	248	249	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	127	128	first strand
Strand 2	H	31	32	anti-parallel
Strand 3	H	354	355	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	38	39	first strand
Strand 2	H	109	117	anti-parallel
Strand 3	H	229	237	anti-parallel
Strand 4	H	177	183	anti-parallel
Strand 5	H	193	196	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	38	39	first strand
Strand 2	H	109	117	anti-parallel
Strand 3	H	42	47	anti-parallel
Strand 4	H	271	274	anti-parallel
Strand 5	H	267	268	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	64	70	first strand
Strand 2	H	94	102	anti-parallel
Strand 3	H	243	244	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	41	43	first strand
Strand 2	L	57	62	anti-parallel
Strand 3	L	3	9	anti-parallel
Strand 4	L	83	85	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	97	98	first strand
Strand 2	L	184	185	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	100	101	first strand
Strand 2	L	160	161	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	146	148	first strand
Strand 2	L	151	155	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	20	21	first strand
Strand 2	I	5	8	anti-parallel
Strand 3	I	45	49	anti-parallel
Strand 4	I	54	58	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	20	21	first strand
Strand 2	J	5	8	anti-parallel
Strand 3	J	45	49	anti-parallel
Strand 4	J	54	58	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WHI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHI