Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WHL entry

There are 10 chains in PDB entry 6WHL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 21	PHE 51
A	ILE 53	LYS 266
B	GLN 21	PHE 51
B	ILE 53	LYS 266
C	GLN 21	PHE 51
C	ILE 53	LYS 266
D	GLN 21	PHE 51
D	ILE 53	LYS 266
E	GLN 21	PHE 51
E	ILE 53	ILE 261

There are122 helices in PDB entry 6WHL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	47	50	Right-handed 310
Helix 2	AA2	A	51	62	Right-handed alpha
Helix 3	AA3	A	83	88	Right-handed 310
Helix 4	AA4	A	91	99	Right-handed alpha
Helix 5	AA5	A	100	123	Right-handed alpha
Helix 6	AA6	A	138	143	Right-handed alpha
Helix 7	AA7	A	152	165	Right-handed alpha
Helix 8	AA8	A	171	182	Right-handed alpha
Helix 9	AA9	A	188	190	Right-handed 310
Helix 10	AB1	A	244	265	Right-handed alpha
Helix 11	AB2	B	47	49	Right-handed 310
Helix 12	AB3	B	50	63	Right-handed alpha
Helix 13	AB4	B	83	88	Right-handed 310
Helix 14	AB5	B	91	99	Right-handed alpha
Helix 15	AB6	B	100	123	Right-handed alpha
Helix 16	AB7	B	138	143	Right-handed alpha
Helix 17	AB8	B	152	165	Right-handed alpha
Helix 18	AB9	B	171	182	Right-handed alpha
Helix 19	AC1	B	188	190	Right-handed 310
Helix 20	AC2	B	244	265	Right-handed alpha
Helix 21	AC3	C	47	49	Right-handed 310
Helix 22	AC4	C	50	63	Right-handed alpha
Helix 23	AC5	C	83	88	Right-handed 310
Helix 24	AC6	C	91	98	Right-handed alpha
Helix 25	AC7	C	100	123	Right-handed alpha
Helix 26	AC8	C	138	143	Right-handed alpha
Helix 27	AC9	C	152	165	Right-handed alpha
Helix 28	AD1	C	171	182	Right-handed alpha
Helix 29	AD2	C	188	190	Right-handed 310
Helix 30	AD3	C	244	265	Right-handed alpha
Helix 31	AD4	D	47	50	Right-handed 310
Helix 32	AD5	D	51	62	Right-handed alpha
Helix 33	AD6	D	83	88	Right-handed 310
Helix 34	AD7	D	91	99	Right-handed alpha
Helix 35	AD8	D	100	112	Right-handed alpha
Helix 36	AD9	D	112	124	Right-handed alpha
Helix 37	AE1	D	138	143	Right-handed alpha
Helix 38	AE2	D	152	165	Right-handed alpha
Helix 39	AE3	D	171	182	Right-handed alpha
Helix 40	AE4	D	188	190	Right-handed 310
Helix 41	AE5	D	244	265	Right-handed alpha
Helix 42	AE6	E	47	50	Right-handed 310
Helix 43	AE7	E	51	62	Right-handed alpha
Helix 44	AE8	E	83	88	Right-handed 310
Helix 45	AE9	E	91	99	Right-handed alpha
Helix 46	AF1	E	100	123	Right-handed alpha
Helix 47	AF2	E	138	143	Right-handed alpha
Helix 48	AF3	E	152	165	Right-handed alpha
Helix 49	AF4	E	171	182	Right-handed alpha
Helix 50	AF5	E	188	190	Right-handed 310
Helix 51	AF6	E	244	265	Right-handed alpha
Helix 52	AF7	F	47	50	Right-handed 310
Helix 53	AF8	F	51	62	Right-handed alpha
Helix 54	AF9	F	83	88	Right-handed 310
Helix 55	AG1	F	91	99	Right-handed alpha
Helix 56	AG2	F	100	123	Right-handed alpha
Helix 57	AG3	F	138	143	Right-handed alpha
Helix 58	AG4	F	152	165	Right-handed alpha
Helix 59	AG5	F	171	182	Right-handed alpha
Helix 60	AG6	F	188	190	Right-handed 310
Helix 61	AG7	F	244	265	Right-handed alpha
Helix 62	AG8	G	47	49	Right-handed 310
Helix 63	AG9	G	50	62	Right-handed alpha
Helix 64	AH1	G	83	88	Right-handed 310
Helix 65	AH2	G	91	99	Right-handed alpha
Helix 66	AH3	G	100	124	Right-handed alpha
Helix 67	AH4	G	138	143	Right-handed alpha
Helix 68	AH5	G	152	165	Right-handed alpha
Helix 69	AH6	G	171	182	Right-handed alpha
Helix 70	AH7	G	188	190	Right-handed 310
Helix 71	AH8	G	244	265	Right-handed alpha
Helix 72	AH9	H	47	49	Right-handed 310
Helix 73	AI1	H	50	62	Right-handed alpha
Helix 74	AI2	H	83	88	Right-handed 310
Helix 75	AI3	H	91	99	Right-handed alpha
Helix 76	AI4	H	100	123	Right-handed alpha
Helix 77	AI5	H	138	143	Right-handed alpha
Helix 78	AI6	H	152	165	Right-handed alpha
Helix 79	AI7	H	171	182	Right-handed alpha
Helix 80	AI8	H	188	190	Right-handed 310
Helix 81	AI9	H	244	265	Right-handed alpha
Helix 82	AJ1	I	47	50	Right-handed 310
Helix 83	AJ2	I	51	62	Right-handed alpha
Helix 84	AJ3	I	83	88	Right-handed 310
Helix 85	AJ4	I	91	99	Right-handed alpha
Helix 86	AJ5	I	100	112	Right-handed alpha
Helix 87	AJ6	I	112	123	Right-handed alpha
Helix 88	AJ7	I	138	143	Right-handed alpha
Helix 89	AJ8	I	152	165	Right-handed alpha
Helix 90	AJ9	I	171	182	Right-handed alpha
Helix 91	AK1	I	188	190	Right-handed 310
Helix 92	AK2	I	244	265	Right-handed alpha
Helix 93	AK3	J	47	50	Right-handed 310
Helix 94	AK4	J	51	62	Right-handed alpha
Helix 95	AK5	J	83	88	Right-handed 310
Helix 96	AK6	J	91	99	Right-handed alpha
Helix 97	AK7	J	100	123	Right-handed alpha
Helix 98	AK8	J	138	143	Right-handed alpha
Helix 99	AK9	J	152	165	Right-handed alpha
Helix 100	AL1	J	171	182	Right-handed alpha
Helix 101	AL2	J	188	190	Right-handed 310
Helix 102	AL3	J	244	265	Right-handed alpha
Helix 103	AL4	K	47	50	Right-handed 310
Helix 104	AL5	K	51	62	Right-handed alpha
Helix 105	AL6	K	83	88	Right-handed 310
Helix 106	AL7	K	91	99	Right-handed alpha
Helix 107	AL8	K	100	124	Right-handed alpha
Helix 108	AL9	K	138	143	Right-handed alpha
Helix 109	AM1	K	152	165	Right-handed alpha
Helix 110	AM2	K	171	182	Right-handed alpha
Helix 111	AM3	K	188	190	Right-handed 310
Helix 112	AM4	K	244	265	Right-handed alpha
Helix 113	AM5	L	47	50	Right-handed 310
Helix 114	AM6	L	51	62	Right-handed alpha
Helix 115	AM7	L	83	88	Right-handed 310
Helix 116	AM8	L	91	99	Right-handed alpha
Helix 117	AM9	L	100	124	Right-handed alpha
Helix 118	AN1	L	138	143	Right-handed alpha
Helix 119	AN2	L	152	165	Right-handed alpha
Helix 120	AN3	L	171	182	Right-handed alpha
Helix 121	AN4	L	188	190	Right-handed 310
Helix 122	AN5	L	244	265	Right-handed alpha

There are 12 sheets in PDB entry 6WHL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	38	first strand
Strand 2	A	22	29	anti-parallel
Strand 3	A	227	236	anti-parallel
Strand 4	A	210	224	anti-parallel
Strand 5	A	192	203	anti-parallel
Strand 6	A	183	186	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	38	first strand
Strand 2	B	22	29	anti-parallel
Strand 3	B	227	236	anti-parallel
Strand 4	B	210	224	anti-parallel
Strand 5	B	192	203	anti-parallel
Strand 6	B	183	186	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	38	first strand
Strand 2	C	22	29	anti-parallel
Strand 3	C	227	236	anti-parallel
Strand 4	C	210	224	anti-parallel
Strand 5	C	192	203	anti-parallel
Strand 6	C	183	186	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	38	first strand
Strand 2	D	22	29	anti-parallel
Strand 3	D	227	236	anti-parallel
Strand 4	D	210	224	anti-parallel
Strand 5	D	192	203	anti-parallel
Strand 6	D	183	186	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	38	first strand
Strand 2	E	22	29	anti-parallel
Strand 3	E	227	236	anti-parallel
Strand 4	E	210	224	anti-parallel
Strand 5	E	192	203	anti-parallel
Strand 6	E	183	186	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	38	first strand
Strand 2	F	22	29	anti-parallel
Strand 3	F	227	236	anti-parallel
Strand 4	F	210	224	anti-parallel
Strand 5	F	191	203	anti-parallel
Strand 6	F	183	187	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	32	38	first strand
Strand 2	G	22	29	anti-parallel
Strand 3	G	227	236	anti-parallel
Strand 4	G	210	224	anti-parallel
Strand 5	G	192	203	anti-parallel
Strand 6	G	183	186	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	32	38	first strand
Strand 2	H	22	29	anti-parallel
Strand 3	H	227	236	anti-parallel
Strand 4	H	210	224	anti-parallel
Strand 5	H	192	203	anti-parallel
Strand 6	H	183	186	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	32	38	first strand
Strand 2	I	22	29	anti-parallel
Strand 3	I	227	236	anti-parallel
Strand 4	I	210	224	anti-parallel
Strand 5	I	192	203	anti-parallel
Strand 6	I	183	186	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	32	38	first strand
Strand 2	J	22	29	anti-parallel
Strand 3	J	227	236	anti-parallel
Strand 4	J	210	224	anti-parallel
Strand 5	J	192	203	anti-parallel
Strand 6	J	183	186	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	32	38	first strand
Strand 2	K	22	29	anti-parallel
Strand 3	K	227	236	anti-parallel
Strand 4	K	210	224	anti-parallel
Strand 5	K	191	203	anti-parallel
Strand 6	K	183	187	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	32	38	first strand
Strand 2	L	23	29	anti-parallel
Strand 3	L	227	236	anti-parallel
Strand 4	L	210	224	anti-parallel
Strand 5	L	192	203	anti-parallel
Strand 6	L	183	186	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WHL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHL