Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WHR entry

There are 4 chains in PDB entry 6WHR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 27	LYS 862
B	SER 34	GLN 845
C	VAL 27	LYS 862
D	SER 34	GLN 845

There are108 helices in PDB entry 6WHR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	50	Right-handed alpha
Helix 2	AA2	A	70	86	Right-handed alpha
Helix 3	AA3	A	104	113	Right-handed alpha
Helix 4	AA4	A	126	130	Right-handed 310
Helix 5	AA5	A	143	148	Right-handed alpha
Helix 6	AA6	A	149	157	Right-handed 310
Helix 7	AA7	A	170	184	Right-handed alpha
Helix 8	AA8	A	225	234	Right-handed alpha
Helix 9	AA9	A	246	260	Right-handed alpha
Helix 10	AB1	A	276	281	Right-handed alpha
Helix 11	AB2	A	297	315	Right-handed alpha
Helix 12	AB3	A	338	346	Right-handed alpha
Helix 13	AB4	A	479	490	Right-handed alpha
Helix 14	AB5	A	520	528	Right-handed alpha
Helix 15	AB6	A	543	548	Right-handed alpha
Helix 16	AB7	A	576	580	Right-handed 310
Helix 17	AB8	A	581	605	Right-handed alpha
Helix 18	AB9	A	625	637	Right-handed alpha
Helix 19	AC1	A	648	678	Right-handed alpha
Helix 20	AC2	A	690	694	Right-handed 310
Helix 21	AC3	A	708	716	Right-handed alpha
Helix 22	AC4	A	717	719	Right-handed 310
Helix 23	AC5	A	720	729	Right-handed alpha
Helix 24	AC6	A	734	743	Right-handed alpha
Helix 25	AC7	A	754	764	Right-handed alpha
Helix 26	AC8	A	789	801	Right-handed alpha
Helix 27	AC9	A	804	814	Right-handed alpha
Helix 28	AD1	A	834	862	Right-handed alpha
Helix 29	AD2	B	47	56	Right-handed alpha
Helix 30	AD3	B	61	64	Right-handed 310
Helix 31	AD4	B	77	93	Right-handed alpha
Helix 32	AD5	B	108	119	Right-handed alpha
Helix 33	AD6	B	149	164	Right-handed alpha
Helix 34	AD7	B	178	191	Right-handed alpha
Helix 35	AD8	B	213	220	Right-handed alpha
Helix 36	AD9	B	234	248	Right-handed alpha
Helix 37	AE1	B	288	310	Right-handed alpha
Helix 38	AE2	B	335	340	Right-handed alpha
Helix 39	AE3	B	460	473	Right-handed alpha
Helix 40	AE4	B	495	503	Right-handed alpha
Helix 41	AE5	B	518	522	Right-handed 310
Helix 42	AE6	B	556	578	Right-handed alpha
Helix 43	AE7	B	601	614	Right-handed alpha
Helix 44	AE8	B	625	654	Right-handed alpha
Helix 45	AE9	B	668	672	Right-handed 310
Helix 46	AF1	B	690	699	Right-handed alpha
Helix 47	AF2	B	699	707	Right-handed alpha
Helix 48	AF3	B	708	710	Right-handed 310
Helix 49	AF4	B	714	723	Right-handed alpha
Helix 50	AF5	B	733	740	Right-handed alpha
Helix 51	AF6	B	741	743	Right-handed 310
Helix 52	AF7	B	772	786	Right-handed alpha
Helix 53	AF8	B	787	797	Right-handed alpha
Helix 54	AF9	B	815	843	Right-handed alpha
Helix 55	AG1	C	35	50	Right-handed alpha
Helix 56	AG2	C	70	86	Right-handed alpha
Helix 57	AG3	C	104	113	Right-handed alpha
Helix 58	AG4	C	126	130	Right-handed 310
Helix 59	AG5	C	143	148	Right-handed alpha
Helix 60	AG6	C	149	157	Right-handed 310
Helix 61	AG7	C	170	184	Right-handed alpha
Helix 62	AG8	C	225	234	Right-handed alpha
Helix 63	AG9	C	246	260	Right-handed alpha
Helix 64	AH1	C	276	281	Right-handed alpha
Helix 65	AH2	C	297	315	Right-handed alpha
Helix 66	AH3	C	338	346	Right-handed alpha
Helix 67	AH4	C	479	490	Right-handed alpha
Helix 68	AH5	C	520	528	Right-handed alpha
Helix 69	AH6	C	543	548	Right-handed alpha
Helix 70	AH7	C	576	580	Right-handed 310
Helix 71	AH8	C	581	605	Right-handed alpha
Helix 72	AH9	C	625	637	Right-handed alpha
Helix 73	AI1	C	648	678	Right-handed alpha
Helix 74	AI2	C	690	694	Right-handed 310
Helix 75	AI3	C	708	716	Right-handed alpha
Helix 76	AI4	C	717	719	Right-handed 310
Helix 77	AI5	C	720	729	Right-handed alpha
Helix 78	AI6	C	734	743	Right-handed alpha
Helix 79	AI7	C	754	764	Right-handed alpha
Helix 80	AI8	C	789	801	Right-handed alpha
Helix 81	AI9	C	804	814	Right-handed alpha
Helix 82	AJ1	C	834	862	Right-handed alpha
Helix 83	AJ2	D	47	56	Right-handed alpha
Helix 84	AJ3	D	61	64	Right-handed 310
Helix 85	AJ4	D	77	93	Right-handed alpha
Helix 86	AJ5	D	108	119	Right-handed alpha
Helix 87	AJ6	D	149	164	Right-handed alpha
Helix 88	AJ7	D	178	191	Right-handed alpha
Helix 89	AJ8	D	213	220	Right-handed alpha
Helix 90	AJ9	D	234	248	Right-handed alpha
Helix 91	AK1	D	288	310	Right-handed alpha
Helix 92	AK2	D	335	340	Right-handed alpha
Helix 93	AK3	D	460	473	Right-handed alpha
Helix 94	AK4	D	495	503	Right-handed alpha
Helix 95	AK5	D	518	522	Right-handed 310
Helix 96	AK6	D	556	578	Right-handed alpha
Helix 97	AK7	D	601	614	Right-handed alpha
Helix 98	AK8	D	625	654	Right-handed alpha
Helix 99	AK9	D	668	672	Right-handed 310
Helix 100	AL1	D	690	699	Right-handed alpha
Helix 101	AL2	D	699	707	Right-handed alpha
Helix 102	AL3	D	708	710	Right-handed 310
Helix 103	AL4	D	714	723	Right-handed alpha
Helix 104	AL5	D	733	740	Right-handed alpha
Helix 105	AL6	D	741	743	Right-handed 310
Helix 106	AL7	D	772	786	Right-handed alpha
Helix 107	AL8	D	787	797	Right-handed alpha
Helix 108	AL9	D	815	843	Right-handed alpha

There are 30 sheets in PDB entry 6WHR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	32	first strand
Strand 2	A	90	92	parallel
Strand 3	A	118	120	parallel
Strand 4	A	137	138	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	216	first strand
Strand 2	A	165	167	parallel
Strand 3	A	242	243	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	292	first strand
Strand 2	A	372	378	anti-parallel
Strand 3	A	381	388	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	422	423	first strand
Strand 2	A	498	499	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	434	first strand
Strand 2	A	473	478	anti-parallel
Strand 3	A	455	458	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	508	511	first strand
Strand 2	A	516	519	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	750	753	first strand
Strand 2	A	559	564	anti-parallel
Strand 3	A	767	768	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	69	first strand
Strand 2	B	35	39	parallel
Strand 3	B	94	99	parallel
Strand 4	B	123	125	parallel
Strand 5	B	143	145	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	204	first strand
Strand 2	B	169	173	parallel
Strand 3	B	227	231	parallel
Strand 4	B	255	257	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	278	280	first strand
Strand 2	B	362	367	anti-parallel
Strand 3	B	373	380	anti-parallel
Strand 4	B	383	385	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	344	first strand
Strand 2	B	347	350	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	475	477	first strand
Strand 2	B	405	409	parallel
Strand 3	B	508	509	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	419	420	first strand
Strand 2	B	456	457	anti-parallel
Strand 3	B	434	435	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	490	first strand
Strand 2	B	493	494	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	684	first strand
Strand 2	B	728	732	parallel
Strand 3	B	531	537	anti-parallel
Strand 4	B	758	761	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	32	first strand
Strand 2	C	90	92	parallel
Strand 3	C	118	120	parallel
Strand 4	C	137	138	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	215	216	first strand
Strand 2	C	165	167	parallel
Strand 3	C	242	243	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	292	first strand
Strand 2	C	372	378	anti-parallel
Strand 3	C	381	388	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	422	423	first strand
Strand 2	C	498	499	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	430	434	first strand
Strand 2	C	473	478	anti-parallel
Strand 3	C	455	458	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	508	511	first strand
Strand 2	C	516	519	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	750	753	first strand
Strand 2	C	559	564	anti-parallel
Strand 3	C	767	768	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	69	first strand
Strand 2	D	35	39	parallel
Strand 3	D	94	99	parallel
Strand 4	D	123	125	parallel
Strand 5	D	143	145	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	199	204	first strand
Strand 2	D	169	173	parallel
Strand 3	D	227	231	parallel
Strand 4	D	255	257	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	278	280	first strand
Strand 2	D	362	367	anti-parallel
Strand 3	D	373	380	anti-parallel
Strand 4	D	383	385	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	341	344	first strand
Strand 2	D	347	350	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	475	477	first strand
Strand 2	D	405	409	parallel
Strand 3	D	508	509	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	419	420	first strand
Strand 2	D	456	457	anti-parallel
Strand 3	D	434	435	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	490	first strand
Strand 2	D	493	494	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	684	first strand
Strand 2	D	728	732	parallel
Strand 3	D	531	537	anti-parallel
Strand 4	D	758	761	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WHR

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHR