Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WHS entry

There are 3 chains in PDB entry 6WHS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	LYS 862
B	SER 34	GLN 845
C	LYS 25	ALA 62

There are106 helices in PDB entry 6WHS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	50	Right-handed alpha
Helix 2	AA2	A	70	86	Right-handed alpha
Helix 3	AA3	A	105	113	Right-handed alpha
Helix 4	AA4	A	125	130	Right-handed 310
Helix 5	AA5	A	143	150	Right-handed alpha
Helix 6	AA6	A	150	158	Right-handed alpha
Helix 7	AA7	A	170	186	Right-handed alpha
Helix 8	AA8	A	225	235	Right-handed alpha
Helix 9	AA9	A	248	260	Right-handed alpha
Helix 10	AB1	A	276	283	Right-handed 310
Helix 11	AB2	A	297	317	Right-handed alpha
Helix 12	AB3	A	339	347	Right-handed alpha
Helix 13	AB4	A	480	492	Right-handed alpha
Helix 14	AB5	A	520	529	Right-handed alpha
Helix 15	AB6	A	541	546	Right-handed alpha
Helix 16	AB7	A	580	604	Right-handed alpha
Helix 17	AB8	A	624	637	Right-handed alpha
Helix 18	AB9	A	647	676	Right-handed alpha
Helix 19	AC1	A	690	694	Right-handed 310
Helix 20	AC2	A	708	717	Right-handed alpha
Helix 21	AC3	A	720	729	Right-handed alpha
Helix 22	AC4	A	734	744	Right-handed alpha
Helix 23	AC5	A	754	764	Right-handed alpha
Helix 24	AC6	A	789	803	Right-handed alpha
Helix 25	AC7	A	804	814	Right-handed alpha
Helix 26	AC8	A	830	862	Right-handed alpha
Helix 27	AC9	B	46	54	Right-handed alpha
Helix 28	AD1	B	77	92	Right-handed alpha
Helix 29	AD2	B	106	119	Right-handed alpha
Helix 30	AD3	B	127	132	Right-handed 310
Helix 31	AD4	B	149	164	Right-handed alpha
Helix 32	AD5	B	178	191	Right-handed alpha
Helix 33	AD6	B	212	220	Right-handed alpha
Helix 34	AD7	B	235	246	Right-handed alpha
Helix 35	AD8	B	259	263	Right-handed 310
Helix 36	AD9	B	283	288	Right-handed alpha
Helix 37	AE1	B	289	311	Right-handed alpha
Helix 38	AE2	B	335	340	Right-handed alpha
Helix 39	AE3	B	460	472	Right-handed alpha
Helix 40	AE4	B	495	503	Right-handed alpha
Helix 41	AE5	B	516	521	Right-handed alpha
Helix 42	AE6	B	557	580	Right-handed alpha
Helix 43	AE7	B	601	615	Right-handed alpha
Helix 44	AE8	B	625	656	Right-handed alpha
Helix 45	AE9	B	668	673	Right-handed alpha
Helix 46	AF1	B	674	677	Right-handed 310
Helix 47	AF2	B	689	696	Right-handed alpha
Helix 48	AF3	B	699	707	Right-handed alpha
Helix 49	AF4	B	714	723	Right-handed alpha
Helix 50	AF5	B	733	741	Right-handed alpha
Helix 51	AF6	B	771	786	Right-handed alpha
Helix 52	AF7	B	787	797	Right-handed alpha
Helix 53	AF8	B	814	844	Right-handed alpha
Helix 54	AF9	C	35	50	Right-handed alpha
Helix 55	AG1	C	70	86	Right-handed alpha
Helix 56	AG2	C	105	113	Right-handed alpha
Helix 57	AG3	C	125	130	Right-handed 310
Helix 58	AG4	C	143	150	Right-handed alpha
Helix 59	AG5	C	150	158	Right-handed alpha
Helix 60	AG6	C	170	186	Right-handed alpha
Helix 61	AG7	C	225	235	Right-handed alpha
Helix 62	AG8	C	248	260	Right-handed alpha
Helix 63	AG9	C	276	283	Right-handed 310
Helix 64	AH1	C	297	317	Right-handed alpha
Helix 65	AH2	C	339	347	Right-handed alpha
Helix 66	AH3	C	480	492	Right-handed alpha
Helix 67	AH4	C	520	529	Right-handed alpha
Helix 68	AH5	C	541	546	Right-handed alpha
Helix 69	AH6	C	580	604	Right-handed alpha
Helix 70	AH7	C	624	637	Right-handed alpha
Helix 71	AH8	C	647	676	Right-handed alpha
Helix 72	AH9	C	690	694	Right-handed 310
Helix 73	AI1	C	708	717	Right-handed alpha
Helix 74	AI2	C	720	729	Right-handed alpha
Helix 75	AI3	C	734	744	Right-handed alpha
Helix 76	AI4	C	754	764	Right-handed alpha
Helix 77	AI5	C	789	803	Right-handed alpha
Helix 78	AI6	C	804	814	Right-handed alpha
Helix 79	AI7	C	830	862	Right-handed alpha
Helix 80	AI8	D	46	54	Right-handed alpha
Helix 81	AI9	D	77	92	Right-handed alpha
Helix 82	AJ1	D	106	119	Right-handed alpha
Helix 83	AJ2	D	127	132	Right-handed 310
Helix 84	AJ3	D	149	164	Right-handed alpha
Helix 85	AJ4	D	178	191	Right-handed alpha
Helix 86	AJ5	D	212	220	Right-handed alpha
Helix 87	AJ6	D	235	246	Right-handed alpha
Helix 88	AJ7	D	259	263	Right-handed 310
Helix 89	AJ8	D	283	288	Right-handed alpha
Helix 90	AJ9	D	289	311	Right-handed alpha
Helix 91	AK1	D	335	340	Right-handed alpha
Helix 92	AK2	D	460	472	Right-handed alpha
Helix 93	AK3	D	495	503	Right-handed alpha
Helix 94	AK4	D	516	521	Right-handed alpha
Helix 95	AK5	D	557	580	Right-handed alpha
Helix 96	AK6	D	601	615	Right-handed alpha
Helix 97	AK7	D	625	656	Right-handed alpha
Helix 98	AK8	D	668	673	Right-handed alpha
Helix 99	AK9	D	674	677	Right-handed 310
Helix 100	AL1	D	689	696	Right-handed alpha
Helix 101	AL2	D	699	707	Right-handed alpha
Helix 102	AL3	D	714	723	Right-handed alpha
Helix 103	AL4	D	733	741	Right-handed alpha
Helix 104	AL5	D	771	786	Right-handed alpha
Helix 105	AL6	D	787	797	Right-handed alpha
Helix 106	AL7	D	814	844	Right-handed alpha

There are 38 sheets in PDB entry 6WHS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	65	first strand
Strand 2	A	26	32	parallel
Strand 3	A	87	92	parallel
Strand 4	A	118	120	parallel
Strand 5	A	137	139	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	218	first strand
Strand 2	A	164	168	parallel
Strand 3	A	239	243	parallel
Strand 4	A	267	269	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	292	first strand
Strand 2	A	372	378	anti-parallel
Strand 3	A	381	389	anti-parallel
Strand 4	A	392	394	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	360	361	first strand
Strand 2	A	367	368	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	423	first strand
Strand 2	A	494	499	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	434	first strand
Strand 2	A	471	478	anti-parallel
Strand 3	A	456	460	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	508	511	first strand
Strand 2	A	516	519	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	550	first strand
Strand 2	A	782	783	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	555	557	first strand
Strand 2	A	777	779	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	750	753	first strand
Strand 2	A	559	564	anti-parallel
Strand 3	A	767	769	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	71	first strand
Strand 2	B	36	40	parallel
Strand 3	B	94	99	parallel
Strand 4	B	123	125	parallel
Strand 5	B	143	144	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	199	first strand
Strand 2	B	168	173	parallel
Strand 3	B	203	204	parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	199	first strand
Strand 2	B	168	173	parallel
Strand 3	B	228	231	parallel
Strand 4	B	256	258	parallel
Strand 5	B	278	282	parallel
Strand 6	B	362	367	anti-parallel
Strand 7	B	373	380	anti-parallel
Strand 8	B	383	385	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	343	344	first strand
Strand 2	B	347	348	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	409	first strand
Strand 2	B	475	479	parallel
Strand 3	B	434	437	parallel
Strand 4	B	455	459	anti-parallel
Strand 5	B	417	420	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	490	first strand
Strand 2	B	493	494	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	508	509	first strand
Strand 2	B	765	766	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	531	532	first strand
Strand 2	B	760	761	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	684	first strand
Strand 2	B	728	732	parallel
Strand 3	B	534	539	anti-parallel
Strand 4	B	748	750	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	65	first strand
Strand 2	C	26	32	parallel
Strand 3	C	87	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	137	139	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	215	218	first strand
Strand 2	C	164	168	parallel
Strand 3	C	239	243	parallel
Strand 4	C	267	269	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	292	first strand
Strand 2	C	372	378	anti-parallel
Strand 3	C	381	389	anti-parallel
Strand 4	C	392	394	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	360	361	first strand
Strand 2	C	367	368	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	418	423	first strand
Strand 2	C	494	499	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	430	434	first strand
Strand 2	C	471	478	anti-parallel
Strand 3	C	456	460	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	508	511	first strand
Strand 2	C	516	519	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	549	550	first strand
Strand 2	C	782	783	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	555	557	first strand
Strand 2	C	777	779	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	750	753	first strand
Strand 2	C	559	564	anti-parallel
Strand 3	C	767	769	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	71	first strand
Strand 2	D	36	40	parallel
Strand 3	D	94	99	parallel
Strand 4	D	123	125	parallel
Strand 5	D	143	144	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	199	first strand
Strand 2	D	168	173	parallel
Strand 3	D	203	204	parallel

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There are 8 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	199	first strand
Strand 2	D	168	173	parallel
Strand 3	D	228	231	parallel
Strand 4	D	256	258	parallel
Strand 5	D	278	282	parallel
Strand 6	D	362	367	anti-parallel
Strand 7	D	373	380	anti-parallel
Strand 8	D	383	385	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	343	344	first strand
Strand 2	D	347	348	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	405	409	first strand
Strand 2	D	475	479	parallel
Strand 3	D	434	437	parallel
Strand 4	D	455	459	anti-parallel
Strand 5	D	417	420	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	490	first strand
Strand 2	D	493	494	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	508	509	first strand
Strand 2	D	765	766	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	531	532	first strand
Strand 2	D	760	761	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	684	first strand
Strand 2	D	728	732	parallel
Strand 3	D	534	539	anti-parallel
Strand 4	D	748	750	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WHS

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHS