Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WHU entry

There are 4 chains in PDB entry 6WHU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	LYS 862
B	ILE 35	GLN 845
C	LYS 25	LYS 862
D	ILE 35	GLN 845

There are110 helices in PDB entry 6WHU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	51	Right-handed alpha
Helix 2	AA2	A	73	80	Right-handed alpha
Helix 3	AA3	A	106	113	Right-handed alpha
Helix 4	AA4	A	143	159	Right-handed alpha
Helix 5	AA5	A	172	183	Right-handed alpha
Helix 6	AA6	A	225	235	Right-handed alpha
Helix 7	AA7	A	245	260	Right-handed alpha
Helix 8	AA8	A	262	266	Right-handed 310
Helix 9	AA9	A	272	275	Right-handed 310
Helix 10	AB1	A	276	281	Right-handed alpha
Helix 11	AB2	A	297	317	Right-handed alpha
Helix 12	AB3	A	338	347	Right-handed alpha
Helix 13	AB4	A	365	369	Right-handed 310
Helix 14	AB5	A	478	491	Right-handed alpha
Helix 15	AB6	A	520	528	Right-handed alpha
Helix 16	AB7	A	543	548	Right-handed alpha
Helix 17	AB8	A	582	603	Right-handed alpha
Helix 18	AB9	A	624	637	Right-handed alpha
Helix 19	AC1	A	647	678	Right-handed alpha
Helix 20	AC2	A	690	695	Right-handed alpha
Helix 21	AC3	A	708	716	Right-handed alpha
Helix 22	AC4	A	721	728	Right-handed alpha
Helix 23	AC5	A	735	744	Right-handed alpha
Helix 24	AC6	A	754	765	Right-handed alpha
Helix 25	AC7	A	789	803	Right-handed alpha
Helix 26	AC8	A	804	814	Right-handed alpha
Helix 27	AC9	A	835	862	Right-handed alpha
Helix 28	AD1	B	77	92	Right-handed alpha
Helix 29	AD2	B	106	117	Right-handed alpha
Helix 30	AD3	B	149	164	Right-handed alpha
Helix 31	AD4	B	179	191	Right-handed alpha
Helix 32	AD5	B	214	220	Right-handed alpha
Helix 33	AD6	B	221	223	Right-handed 310
Helix 34	AD7	B	233	247	Right-handed alpha
Helix 35	AD8	B	259	263	Right-handed 310
Helix 36	AD9	B	288	310	Right-handed alpha
Helix 37	AE1	B	328	339	Right-handed alpha
Helix 38	AE2	B	460	472	Right-handed alpha
Helix 39	AE3	B	496	503	Right-handed alpha
Helix 40	AE4	B	516	523	Right-handed alpha
Helix 41	AE5	B	557	581	Right-handed alpha
Helix 42	AE6	B	601	615	Right-handed alpha
Helix 43	AE7	B	627	654	Right-handed alpha
Helix 44	AE8	B	668	673	Right-handed alpha
Helix 45	AE9	B	674	677	Right-handed 310
Helix 46	AF1	B	690	696	Right-handed alpha
Helix 47	AF2	B	700	706	Right-handed alpha
Helix 48	AF3	B	707	710	Right-handed 310
Helix 49	AF4	B	714	723	Right-handed alpha
Helix 50	AF5	B	733	740	Right-handed alpha
Helix 51	AF6	B	773	787	Right-handed alpha
Helix 52	AF7	B	788	797	Right-handed alpha
Helix 53	AF8	B	815	817	Right-handed 310
Helix 54	AF9	B	818	837	Right-handed alpha
Helix 55	AG1	B	839	844	Right-handed alpha
Helix 56	AG2	C	35	51	Right-handed alpha
Helix 57	AG3	C	73	80	Right-handed alpha
Helix 58	AG4	C	106	113	Right-handed alpha
Helix 59	AG5	C	143	159	Right-handed alpha
Helix 60	AG6	C	172	183	Right-handed alpha
Helix 61	AG7	C	225	235	Right-handed alpha
Helix 62	AG8	C	245	260	Right-handed alpha
Helix 63	AG9	C	262	266	Right-handed 310
Helix 64	AH1	C	272	275	Right-handed 310
Helix 65	AH2	C	276	281	Right-handed alpha
Helix 66	AH3	C	297	317	Right-handed alpha
Helix 67	AH4	C	338	347	Right-handed alpha
Helix 68	AH5	C	365	369	Right-handed 310
Helix 69	AH6	C	478	491	Right-handed alpha
Helix 70	AH7	C	520	528	Right-handed alpha
Helix 71	AH8	C	543	548	Right-handed alpha
Helix 72	AH9	C	582	601	Right-handed alpha
Helix 73	AI1	C	624	637	Right-handed alpha
Helix 74	AI2	C	647	678	Right-handed alpha
Helix 75	AI3	C	690	695	Right-handed alpha
Helix 76	AI4	C	708	716	Right-handed alpha
Helix 77	AI5	C	721	728	Right-handed alpha
Helix 78	AI6	C	735	744	Right-handed alpha
Helix 79	AI7	C	754	765	Right-handed alpha
Helix 80	AI8	C	789	803	Right-handed alpha
Helix 81	AI9	C	804	814	Right-handed alpha
Helix 82	AJ1	C	835	862	Right-handed alpha
Helix 83	AJ2	D	77	92	Right-handed alpha
Helix 84	AJ3	D	106	117	Right-handed alpha
Helix 85	AJ4	D	149	164	Right-handed alpha
Helix 86	AJ5	D	179	191	Right-handed alpha
Helix 87	AJ6	D	214	220	Right-handed alpha
Helix 88	AJ7	D	221	223	Right-handed 310
Helix 89	AJ8	D	233	247	Right-handed alpha
Helix 90	AJ9	D	259	263	Right-handed 310
Helix 91	AK1	D	288	310	Right-handed alpha
Helix 92	AK2	D	328	339	Right-handed alpha
Helix 93	AK3	D	460	472	Right-handed alpha
Helix 94	AK4	D	496	503	Right-handed alpha
Helix 95	AK5	D	516	523	Right-handed alpha
Helix 96	AK6	D	557	581	Right-handed alpha
Helix 97	AK7	D	601	615	Right-handed alpha
Helix 98	AK8	D	627	654	Right-handed alpha
Helix 99	AK9	D	668	673	Right-handed alpha
Helix 100	AL1	D	674	677	Right-handed 310
Helix 101	AL2	D	690	696	Right-handed alpha
Helix 102	AL3	D	700	706	Right-handed alpha
Helix 103	AL4	D	707	710	Right-handed 310
Helix 104	AL5	D	714	723	Right-handed alpha
Helix 105	AL6	D	733	740	Right-handed alpha
Helix 106	AL7	D	773	787	Right-handed alpha
Helix 107	AL8	D	788	797	Right-handed alpha
Helix 108	AL9	D	815	817	Right-handed 310
Helix 109	AM1	D	818	837	Right-handed alpha
Helix 110	AM2	D	839	844	Right-handed alpha

There are 32 sheets in PDB entry 6WHU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	66	first strand
Strand 2	A	28	33	parallel
Strand 3	A	87	92	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	211	217	first strand
Strand 2	A	162	167	parallel
Strand 3	A	239	243	parallel
Strand 4	A	267	268	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	292	first strand
Strand 2	A	371	377	anti-parallel
Strand 3	A	382	389	anti-parallel
Strand 4	A	392	394	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	498	first strand
Strand 2	A	420	422	parallel
Strand 3	A	533	538	parallel
Strand 4	A	780	783	anti-parallel
Strand 5	A	549	550	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	432	433	first strand
Strand 2	A	473	476	anti-parallel
Strand 3	A	455	458	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	557	first strand
Strand 2	A	777	778	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	703	first strand
Strand 2	A	749	753	parallel
Strand 3	A	559	564	anti-parallel
Strand 4	A	767	770	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	42	first strand
Strand 2	B	98	101	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	124	first strand
Strand 2	B	143	144	parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	202	first strand
Strand 2	B	169	173	parallel
Strand 3	B	228	231	parallel
Strand 4	B	256	258	parallel
Strand 5	B	276	281	parallel
Strand 6	B	362	367	anti-parallel
Strand 7	B	373	379	anti-parallel
Strand 8	B	384	385	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	406	first strand
Strand 2	B	475	476	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	408	409	first strand
Strand 2	B	508	509	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	488	490	first strand
Strand 2	B	493	495	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	524	525	first strand
Strand 2	B	765	766	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	530	532	first strand
Strand 2	B	760	762	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	537	first strand
Strand 2	B	728	732	anti-parallel
Strand 3	B	683	684	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	66	first strand
Strand 2	C	28	33	parallel
Strand 3	C	87	92	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	211	217	first strand
Strand 2	C	162	167	parallel
Strand 3	C	239	243	parallel
Strand 4	C	267	268	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	292	first strand
Strand 2	C	371	377	anti-parallel
Strand 3	C	382	389	anti-parallel
Strand 4	C	392	394	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	498	first strand
Strand 2	C	420	422	parallel
Strand 3	C	533	538	parallel
Strand 4	C	780	783	anti-parallel
Strand 5	C	549	550	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	432	433	first strand
Strand 2	C	473	476	anti-parallel
Strand 3	C	455	458	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	556	557	first strand
Strand 2	C	777	778	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	702	703	first strand
Strand 2	C	749	753	parallel
Strand 3	C	559	564	anti-parallel
Strand 4	C	767	770	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	42	first strand
Strand 2	D	98	101	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	124	first strand
Strand 2	D	143	144	parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	199	202	first strand
Strand 2	D	169	173	parallel
Strand 3	D	228	231	parallel
Strand 4	D	256	258	parallel
Strand 5	D	276	281	parallel
Strand 6	D	362	367	anti-parallel
Strand 7	D	373	379	anti-parallel
Strand 8	D	384	385	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	405	406	first strand
Strand 2	D	475	476	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	408	409	first strand
Strand 2	D	508	509	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	488	490	first strand
Strand 2	D	493	495	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	525	first strand
Strand 2	D	765	766	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	530	532	first strand
Strand 2	D	760	762	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	534	537	first strand
Strand 2	D	728	732	anti-parallel
Strand 3	D	683	684	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WHU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHU