Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WHW entry

There are 4 chains in PDB entry 6WHW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	LYS 862
B	SER 34	GLN 845
C	LYS 25	LYS 862
D	SER 34	GLN 845

There are116 helices in PDB entry 6WHW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	51	Right-handed alpha
Helix 2	AA2	A	70	73	Right-handed 310
Helix 3	AA3	A	74	83	Right-handed alpha
Helix 4	AA4	A	105	113	Right-handed 310
Helix 5	AA5	A	125	130	Right-handed 310
Helix 6	AA6	A	143	148	Right-handed 310
Helix 7	AA7	A	149	158	Right-handed alpha
Helix 8	AA8	A	171	185	Right-handed alpha
Helix 9	AA9	A	225	234	Right-handed alpha
Helix 10	AB1	A	246	257	Right-handed alpha
Helix 11	AB2	A	272	275	Right-handed 310
Helix 12	AB3	A	276	280	Right-handed 310
Helix 13	AB4	A	297	300	Right-handed 310
Helix 14	AB5	A	301	317	Right-handed alpha
Helix 15	AB6	A	338	347	Right-handed alpha
Helix 16	AB7	A	402	406	Right-handed 310
Helix 17	AB8	A	479	492	Right-handed alpha
Helix 18	AB9	A	520	528	Right-handed alpha
Helix 19	AC1	A	541	546	Right-handed alpha
Helix 20	AC2	A	580	604	Right-handed alpha
Helix 21	AC3	A	624	635	Right-handed alpha
Helix 22	AC4	A	648	679	Right-handed alpha
Helix 23	AC5	A	690	695	Right-handed alpha
Helix 24	AC6	A	708	716	Right-handed alpha
Helix 25	AC7	A	720	728	Right-handed alpha
Helix 26	AC8	A	734	743	Right-handed alpha
Helix 27	AC9	A	754	764	Right-handed alpha
Helix 28	AD1	A	789	800	Right-handed alpha
Helix 29	AD2	A	804	814	Right-handed alpha
Helix 30	AD3	A	834	859	Right-handed alpha
Helix 31	AD4	B	48	56	Right-handed 310
Helix 32	AD5	B	58	62	Right-handed 310
Helix 33	AD6	B	77	93	Right-handed alpha
Helix 34	AD7	B	107	118	Right-handed alpha
Helix 35	AD8	B	149	164	Right-handed alpha
Helix 36	AD9	B	178	193	Right-handed alpha
Helix 37	AE1	B	211	222	Right-handed alpha
Helix 38	AE2	B	233	247	Right-handed alpha
Helix 39	AE3	B	259	263	Right-handed 310
Helix 40	AE4	B	288	300	Right-handed alpha
Helix 41	AE5	B	302	311	Right-handed alpha
Helix 42	AE6	B	328	337	Right-handed alpha
Helix 43	AE7	B	460	473	Right-handed alpha
Helix 44	AE8	B	498	503	Right-handed alpha
Helix 45	AE9	B	516	520	Right-handed 310
Helix 46	AF1	B	548	552	Right-handed 310
Helix 47	AF2	B	555	578	Right-handed alpha
Helix 48	AF3	B	603	615	Right-handed alpha
Helix 49	AF4	B	627	651	Right-handed alpha
Helix 50	AF5	B	668	673	Right-handed alpha
Helix 51	AF6	B	689	696	Right-handed alpha
Helix 52	AF7	B	699	706	Right-handed alpha
Helix 53	AF8	B	707	710	Right-handed 310
Helix 54	AF9	B	714	720	Right-handed alpha
Helix 55	AG1	B	733	741	Right-handed alpha
Helix 56	AG2	B	771	786	Right-handed alpha
Helix 57	AG3	B	787	797	Right-handed alpha
Helix 58	AG4	B	814	840	Right-handed alpha
Helix 59	AG5	C	35	51	Right-handed alpha
Helix 60	AG6	C	70	73	Right-handed 310
Helix 61	AG7	C	74	83	Right-handed alpha
Helix 62	AG8	C	105	113	Right-handed 310
Helix 63	AG9	C	125	130	Right-handed 310
Helix 64	AH1	C	143	148	Right-handed 310
Helix 65	AH2	C	149	158	Right-handed alpha
Helix 66	AH3	C	171	185	Right-handed alpha
Helix 67	AH4	C	225	234	Right-handed alpha
Helix 68	AH5	C	246	257	Right-handed alpha
Helix 69	AH6	C	272	275	Right-handed 310
Helix 70	AH7	C	276	280	Right-handed 310
Helix 71	AH8	C	297	300	Right-handed 310
Helix 72	AH9	C	301	317	Right-handed alpha
Helix 73	AI1	C	338	347	Right-handed alpha
Helix 74	AI2	C	402	406	Right-handed 310
Helix 75	AI3	C	479	492	Right-handed alpha
Helix 76	AI4	C	520	528	Right-handed alpha
Helix 77	AI5	C	541	546	Right-handed alpha
Helix 78	AI6	C	580	604	Right-handed alpha
Helix 79	AI7	C	624	635	Right-handed alpha
Helix 80	AI8	C	648	679	Right-handed alpha
Helix 81	AI9	C	690	695	Right-handed alpha
Helix 82	AJ1	C	708	716	Right-handed alpha
Helix 83	AJ2	C	720	728	Right-handed alpha
Helix 84	AJ3	C	734	743	Right-handed alpha
Helix 85	AJ4	C	754	764	Right-handed alpha
Helix 86	AJ5	C	789	800	Right-handed alpha
Helix 87	AJ6	C	804	814	Right-handed alpha
Helix 88	AJ7	C	834	859	Right-handed alpha
Helix 89	AJ8	D	48	56	Right-handed 310
Helix 90	AJ9	D	58	62	Right-handed 310
Helix 91	AK1	D	77	93	Right-handed alpha
Helix 92	AK2	D	107	118	Right-handed alpha
Helix 93	AK3	D	149	164	Right-handed alpha
Helix 94	AK4	D	178	193	Right-handed alpha
Helix 95	AK5	D	211	222	Right-handed alpha
Helix 96	AK6	D	233	247	Right-handed alpha
Helix 97	AK7	D	259	263	Right-handed 310
Helix 98	AK8	D	288	300	Right-handed alpha
Helix 99	AK9	D	302	311	Right-handed alpha
Helix 100	AL1	D	328	337	Right-handed alpha
Helix 101	AL2	D	460	473	Right-handed alpha
Helix 102	AL3	D	498	503	Right-handed alpha
Helix 103	AL4	D	516	520	Right-handed 310
Helix 104	AL5	D	548	552	Right-handed 310
Helix 105	AL6	D	555	578	Right-handed alpha
Helix 106	AL7	D	603	615	Right-handed alpha
Helix 107	AL8	D	627	651	Right-handed alpha
Helix 108	AL9	D	668	673	Right-handed alpha
Helix 109	AM1	D	689	696	Right-handed alpha
Helix 110	AM2	D	699	706	Right-handed alpha
Helix 111	AM3	D	707	710	Right-handed 310
Helix 112	AM4	D	714	720	Right-handed alpha
Helix 113	AM5	D	733	741	Right-handed alpha
Helix 114	AM6	D	771	786	Right-handed alpha
Helix 115	AM7	D	787	797	Right-handed alpha
Helix 116	AM8	D	814	840	Right-handed alpha

There are 42 sheets in PDB entry 6WHW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	60	first strand
Strand 2	A	26	32	parallel
Strand 3	A	87	92	parallel
Strand 4	A	118	120	parallel
Strand 5	A	137	139	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	217	first strand
Strand 2	A	164	167	parallel
Strand 3	A	239	242	parallel
Strand 4	A	267	270	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	289	first strand
Strand 2	A	375	378	anti-parallel
Strand 3	A	381	384	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	360	361	first strand
Strand 2	A	367	368	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	371	372	first strand
Strand 2	A	386	389	anti-parallel
Strand 3	A	392	395	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	497	499	first strand
Strand 2	A	421	423	parallel
Strand 3	A	533	538	parallel
Strand 4	A	777	784	anti-parallel
Strand 5	A	548	550	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	497	499	first strand
Strand 2	A	421	423	parallel
Strand 3	A	533	538	parallel
Strand 4	A	777	784	anti-parallel
Strand 5	A	555	557	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	433	first strand
Strand 2	A	472	478	anti-parallel
Strand 3	A	455	459	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	509	510	first strand
Strand 2	A	517	518	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	703	first strand
Strand 2	A	749	753	parallel
Strand 3	A	559	564	anti-parallel
Strand 4	A	767	769	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	38	first strand
Strand 2	B	68	69	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	72	73	first strand
Strand 2	B	40	42	parallel
Strand 3	B	97	101	parallel
Strand 4	B	123	125	parallel
Strand 5	B	143	145	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	204	first strand
Strand 2	B	169	173	parallel
Strand 3	B	227	231	parallel
Strand 4	B	255	257	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	278	281	first strand
Strand 2	B	362	367	anti-parallel
Strand 3	B	373	380	anti-parallel
Strand 4	B	383	386	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	343	344	first strand
Strand 2	B	347	348	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	408	410	first strand
Strand 2	B	478	480	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	417	420	first strand
Strand 2	B	456	459	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	508	509	first strand
Strand 2	B	765	766	anti-parallel
Strand 3	B	524	525	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	531	532	first strand
Strand 2	B	760	761	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	537	first strand
Strand 2	B	728	732	anti-parallel
Strand 3	B	683	684	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	655	657	first strand
Strand 2	B	807	809	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	26	32	parallel
Strand 3	C	87	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	137	139	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	215	217	first strand
Strand 2	C	164	167	parallel
Strand 3	C	239	242	parallel
Strand 4	C	267	270	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	289	first strand
Strand 2	C	375	378	anti-parallel
Strand 3	C	381	384	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	360	361	first strand
Strand 2	C	367	368	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	371	372	first strand
Strand 2	C	386	389	anti-parallel
Strand 3	C	392	395	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	497	499	first strand
Strand 2	C	421	423	parallel
Strand 3	C	533	538	parallel
Strand 4	C	777	784	anti-parallel
Strand 5	C	548	550	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	497	499	first strand
Strand 2	C	421	423	parallel
Strand 3	C	533	538	parallel
Strand 4	C	777	784	anti-parallel
Strand 5	C	555	557	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	430	433	first strand
Strand 2	C	472	478	anti-parallel
Strand 3	C	455	459	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	509	510	first strand
Strand 2	C	517	518	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	702	703	first strand
Strand 2	C	749	753	parallel
Strand 3	C	559	564	anti-parallel
Strand 4	C	767	769	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	38	first strand
Strand 2	D	68	69	parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	72	73	first strand
Strand 2	D	40	42	parallel
Strand 3	D	97	101	parallel
Strand 4	D	123	125	parallel
Strand 5	D	143	145	parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	202	204	first strand
Strand 2	D	169	173	parallel
Strand 3	D	227	231	parallel
Strand 4	D	255	257	parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	278	281	first strand
Strand 2	D	362	367	anti-parallel
Strand 3	D	373	380	anti-parallel
Strand 4	D	383	386	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	343	344	first strand
Strand 2	D	347	348	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	408	410	first strand
Strand 2	D	478	480	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	417	420	first strand
Strand 2	D	456	459	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	508	509	first strand
Strand 2	D	765	766	anti-parallel
Strand 3	D	524	525	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	531	532	first strand
Strand 2	D	760	761	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	534	537	first strand
Strand 2	D	728	732	anti-parallel
Strand 3	D	683	684	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	655	657	first strand
Strand 2	D	807	809	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WHW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WHW