Analysis of interatomic Contacts of Structural Units in PDB entry:
6WI1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WI1 entry

There are 4 chains in PDB entry 6WI1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	LYS 862
B	SER 34	TRP 844
C	LYS 25	LYS 862
D	SER 34	TRP 844

There are102 helices in PDB entry 6WI1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	37	53	Right-handed alpha
Helix 2	AA2	A	70	84	Right-handed alpha
Helix 3	AA3	A	104	113	Right-handed alpha
Helix 4	AA4	A	125	130	Right-handed 310
Helix 5	AA5	A	143	146	Right-handed 310
Helix 6	AA6	A	147	159	Right-handed alpha
Helix 7	AA7	A	170	185	Right-handed alpha
Helix 8	AA8	A	225	234	Right-handed alpha
Helix 9	AA9	A	245	260	Right-handed alpha
Helix 10	AB1	A	297	317	Right-handed alpha
Helix 11	AB2	A	338	348	Right-handed alpha
Helix 12	AB3	A	478	492	Right-handed alpha
Helix 13	AB4	A	520	529	Right-handed alpha
Helix 14	AB5	A	541	546	Right-handed alpha
Helix 15	AB6	A	581	605	Right-handed alpha
Helix 16	AB7	A	624	637	Right-handed alpha
Helix 17	AB8	A	647	679	Right-handed alpha
Helix 18	AB9	A	690	694	Right-handed 310
Helix 19	AC1	A	708	716	Right-handed alpha
Helix 20	AC2	A	717	719	Right-handed 310
Helix 21	AC3	A	720	729	Right-handed alpha
Helix 22	AC4	A	734	744	Right-handed alpha
Helix 23	AC5	A	754	764	Right-handed alpha
Helix 24	AC6	A	787	803	Right-handed alpha
Helix 25	AC7	A	804	814	Right-handed alpha
Helix 26	AC8	A	830	862	Right-handed alpha
Helix 27	AC9	B	48	53	Right-handed alpha
Helix 28	AD1	B	54	62	Right-handed 310
Helix 29	AD2	B	77	93	Right-handed alpha
Helix 30	AD3	B	106	120	Right-handed alpha
Helix 31	AD4	B	150	164	Right-handed alpha
Helix 32	AD5	B	178	192	Right-handed alpha
Helix 33	AD6	B	212	222	Right-handed alpha
Helix 34	AD7	B	233	247	Right-handed alpha
Helix 35	AD8	B	288	312	Right-handed alpha
Helix 36	AD9	B	325	331	Right-handed alpha
Helix 37	AE1	B	335	341	Right-handed alpha
Helix 38	AE2	B	459	473	Right-handed alpha
Helix 39	AE3	B	495	503	Right-handed alpha
Helix 40	AE4	B	516	521	Right-handed alpha
Helix 41	AE5	B	555	578	Right-handed alpha
Helix 42	AE6	B	601	615	Right-handed alpha
Helix 43	AE7	B	626	654	Right-handed alpha
Helix 44	AE8	B	668	673	Right-handed alpha
Helix 45	AE9	B	690	699	Right-handed alpha
Helix 46	AF1	B	699	707	Right-handed alpha
Helix 47	AF2	B	714	724	Right-handed alpha
Helix 48	AF3	B	733	742	Right-handed alpha
Helix 49	AF4	B	771	786	Right-handed alpha
Helix 50	AF5	B	788	795	Right-handed alpha
Helix 51	AF6	B	814	844	Right-handed alpha
Helix 52	AF7	C	37	53	Right-handed alpha
Helix 53	AF8	C	70	84	Right-handed alpha
Helix 54	AF9	C	104	113	Right-handed alpha
Helix 55	AG1	C	125	130	Right-handed 310
Helix 56	AG2	C	143	146	Right-handed 310
Helix 57	AG3	C	147	159	Right-handed alpha
Helix 58	AG4	C	170	185	Right-handed alpha
Helix 59	AG5	C	225	234	Right-handed alpha
Helix 60	AG6	C	245	260	Right-handed alpha
Helix 61	AG7	C	297	317	Right-handed alpha
Helix 62	AG8	C	338	348	Right-handed alpha
Helix 63	AG9	C	478	492	Right-handed alpha
Helix 64	AH1	C	520	529	Right-handed alpha
Helix 65	AH2	C	541	546	Right-handed alpha
Helix 66	AH3	C	581	605	Right-handed alpha
Helix 67	AH4	C	624	637	Right-handed alpha
Helix 68	AH5	C	647	679	Right-handed alpha
Helix 69	AH6	C	690	694	Right-handed 310
Helix 70	AH7	C	708	716	Right-handed alpha
Helix 71	AH8	C	717	719	Right-handed 310
Helix 72	AH9	C	720	729	Right-handed alpha
Helix 73	AI1	C	734	744	Right-handed alpha
Helix 74	AI2	C	754	764	Right-handed alpha
Helix 75	AI3	C	787	803	Right-handed alpha
Helix 76	AI4	C	804	814	Right-handed alpha
Helix 77	AI5	C	830	862	Right-handed alpha
Helix 78	AI6	D	48	53	Right-handed alpha
Helix 79	AI7	D	54	62	Right-handed 310
Helix 80	AI8	D	77	93	Right-handed alpha
Helix 81	AI9	D	106	120	Right-handed alpha
Helix 82	AJ1	D	150	164	Right-handed alpha
Helix 83	AJ2	D	178	192	Right-handed alpha
Helix 84	AJ3	D	212	222	Right-handed alpha
Helix 85	AJ4	D	233	247	Right-handed alpha
Helix 86	AJ5	D	288	312	Right-handed alpha
Helix 87	AJ6	D	325	331	Right-handed alpha
Helix 88	AJ7	D	335	341	Right-handed alpha
Helix 89	AJ8	D	459	473	Right-handed alpha
Helix 90	AJ9	D	495	503	Right-handed alpha
Helix 91	AK1	D	516	521	Right-handed alpha
Helix 92	AK2	D	555	578	Right-handed alpha
Helix 93	AK3	D	601	615	Right-handed alpha
Helix 94	AK4	D	626	654	Right-handed alpha
Helix 95	AK5	D	668	673	Right-handed alpha
Helix 96	AK6	D	690	699	Right-handed alpha
Helix 97	AK7	D	699	707	Right-handed alpha
Helix 98	AK8	D	714	724	Right-handed alpha
Helix 99	AK9	D	733	742	Right-handed alpha
Helix 100	AL1	D	771	786	Right-handed alpha
Helix 101	AL2	D	788	795	Right-handed alpha
Helix 102	AL3	D	814	844	Right-handed alpha

There are 34 sheets in PDB entry 6WI1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	61	first strand
Strand 2	A	26	33	parallel
Strand 3	A	64	66	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	61	first strand
Strand 2	A	26	33	parallel
Strand 3	A	87	92	parallel
Strand 4	A	118	120	parallel
Strand 5	A	138	139	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	211	216	first strand
Strand 2	A	162	167	parallel
Strand 3	A	239	243	parallel
Strand 4	A	267	269	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	292	first strand
Strand 2	A	372	374	anti-parallel
Strand 3	A	386	389	anti-parallel
Strand 4	A	392	394	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	431	434	first strand
Strand 2	A	474	477	anti-parallel
Strand 3	A	455	458	anti-parallel
Strand 4	A	497	499	parallel
Strand 5	A	421	423	parallel
Strand 6	A	533	534	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	508	510	first strand
Strand 2	A	517	519	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	550	first strand
Strand 2	A	782	783	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	557	first strand
Strand 2	A	777	778	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	703	first strand
Strand 2	A	749	753	parallel
Strand 3	A	559	564	anti-parallel
Strand 4	A	767	770	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	73	first strand
Strand 2	B	37	42	parallel
Strand 3	B	96	100	parallel
Strand 4	B	123	125	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	204	first strand
Strand 2	B	170	173	parallel
Strand 3	B	227	231	parallel
Strand 4	B	255	258	parallel
Strand 5	B	278	282	parallel
Strand 6	B	362	367	anti-parallel
Strand 7	B	373	379	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	343	344	first strand
Strand 2	B	347	348	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	408	409	first strand
Strand 2	B	508	509	parallel
Strand 3	B	765	766	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	420	first strand
Strand 2	B	452	458	anti-parallel
Strand 3	B	434	439	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	490	first strand
Strand 2	B	493	494	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	728	732	first strand
Strand 2	B	531	538	anti-parallel
Strand 3	B	748	749	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	728	732	first strand
Strand 2	B	531	538	anti-parallel
Strand 3	B	757	761	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	26	33	parallel
Strand 3	C	64	66	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	26	33	parallel
Strand 3	C	87	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	138	139	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	211	216	first strand
Strand 2	C	162	167	parallel
Strand 3	C	239	243	parallel
Strand 4	C	267	269	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	290	292	first strand
Strand 2	C	372	374	anti-parallel
Strand 3	C	386	389	anti-parallel
Strand 4	C	392	394	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	431	434	first strand
Strand 2	C	474	477	anti-parallel
Strand 3	C	455	458	anti-parallel
Strand 4	C	497	499	parallel
Strand 5	C	421	423	parallel
Strand 6	C	533	534	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	508	510	first strand
Strand 2	C	517	519	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	549	550	first strand
Strand 2	C	782	783	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	556	557	first strand
Strand 2	C	777	778	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	702	703	first strand
Strand 2	C	749	753	parallel
Strand 3	C	559	564	anti-parallel
Strand 4	C	767	770	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	73	first strand
Strand 2	D	37	42	parallel
Strand 3	D	96	100	parallel
Strand 4	D	123	125	parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	201	204	first strand
Strand 2	D	170	173	parallel
Strand 3	D	227	231	parallel
Strand 4	D	255	258	parallel
Strand 5	D	278	282	parallel
Strand 6	D	362	367	anti-parallel
Strand 7	D	373	379	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	343	344	first strand
Strand 2	D	347	348	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	408	409	first strand
Strand 2	D	508	509	parallel
Strand 3	D	765	766	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	420	first strand
Strand 2	D	452	458	anti-parallel
Strand 3	D	434	439	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	490	first strand
Strand 2	D	493	494	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	728	732	first strand
Strand 2	D	531	538	anti-parallel
Strand 3	D	748	749	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	728	732	first strand
Strand 2	D	531	538	anti-parallel
Strand 3	D	757	761	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WI1

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WI1