Analysis of interatomic Contacts of Structural Units in PDB entry:
6WIK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WIK entry

There are 3 chains in PDB entry 6WIK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASP 21GLU 233
D
 GLU 20ALA 238
A
 LEU 17LEU 551
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6WIK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
141 146Right-handed alpha
Helix 2
AA2
C
204 209Right-handed alpha
Helix 3
AA3
D
47 51Right-handed 310
Helix 4
AA4
D
106 110Right-handed 310
Helix 5
AA5
D
181 183Right-handed 310
Helix 6
AA6
A
17 21Right-handed 310
Helix 7
AA7
A
23 54Right-handed alpha
Helix 8
AA8
A
61 86Right-handed alpha
Helix 9
AA9
A
88 115Right-handed alpha
Helix 10
AB1
A
127 153Right-handed alpha
Helix 11
AB2
A
154 164Right-handed alpha
Helix 12
AB3
A
168 200Right-handed alpha
Helix 13
AB4
A
203 230Right-handed alpha
Helix 14
AB5
A
231 235Right-handed 310
Helix 15
AB6
A
290 305Right-handed alpha
Helix 16
AB7
A
307 318Right-handed alpha
Helix 17
AB8
A
326 336Right-handed alpha
Helix 18
AB9
A
338 367Right-handed alpha
Helix 19
AC1
A
368 393Right-handed alpha
Helix 20
AC2
A
454 484Right-handed alpha
Helix 21
AC3
A
489 511Right-handed alpha
Helix 22
AC4
A
522 545Right-handed alpha
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There are 10 sheets in PDB entry 6WIK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 33first strand
Strand 2
C
122 126parallel
Strand 3
C
105 110anti-parallel
Strand 4
C
53 58anti-parallel
Strand 5
C
65 69anti-parallel
Strand 6
C
73 74anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 33first strand
Strand 2
C
122 126parallel
Strand 3
C
105 110anti-parallel
Strand 4
C
117 118anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
39 44first strand
Strand 2
C
90 95anti-parallel
Strand 3
C
82 87anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
137 138first strand
Strand 2
C
149 159anti-parallel
Strand 3
C
193 202anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 170first strand
Strand 2
C
173 174anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
211 216first strand
Strand 2
C
225 230anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 25first strand
Strand 2
D
36 44anti-parallel
Strand 3
D
97 103anti-parallel
Strand 4
D
87 92anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 31first strand
Strand 2
D
133 137parallel
Strand 3
D
111 118anti-parallel
Strand 4
D
52 58anti-parallel
Strand 5
D
64 71anti-parallel
Strand 6
D
76 79anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
145 147first strand
Strand 2
D
164 168anti-parallel
Strand 3
D
199 206anti-parallel
Strand 4
D
188 196anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
178 179first strand
Strand 2
D
219 224anti-parallel
Strand 3
D
229 234anti-parallel
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