Analysis of interatomic Contacts of Structural Units in PDB entry:
6WIL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WIL entry

There is 1 chain in PDB entry 6WIL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1TYR 560
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6WIL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 28Right-handed alpha
Helix 2
AA2
A
69 75Right-handed alpha
Helix 3
AA3
A
76 86Right-handed alpha
Helix 4
AA4
A
96 114Right-handed alpha
Helix 5
AA5
A
125 130Right-handed 310
Helix 6
AA6
A
153 161Right-handed alpha
Helix 7
AA7
A
170 182Right-handed alpha
Helix 8
AA8
A
352 355Right-handed 310
Helix 9
AA9
A
450 454Right-handed 310
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There are 5 sheets in PDB entry 6WIL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
94 95anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
132 138parallel
Strand 3
A
120 123anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 149first strand
Strand 2
A
204 213parallel
Strand 3
A
185 193anti-parallel
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There are 18 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 350first strand
Strand 2
A
329 346anti-parallel
Strand 3
A
356 371anti-parallel
Strand 4
A
374 386anti-parallel
Strand 5
A
414 429anti-parallel
Strand 6
A
432 444anti-parallel
Strand 7
A
476 487anti-parallel
Strand 8
A
493 505anti-parallel
Strand 9
A
515 526anti-parallel
Strand 10
A
530 541anti-parallel
Strand 11
A
550 560anti-parallel
Strand 12
A
217 228anti-parallel
Strand 13
A
232 243anti-parallel
Strand 14
A
251 261anti-parallel
Strand 15
A
266 279anti-parallel
Strand 16
A
282 295anti-parallel
Strand 17
A
308 326anti-parallel
Strand 18
A
329 346anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 457first strand
Strand 2
A
472 474anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il