Analysis of interatomic Contacts of Structural Units in PDB entry:
6WIV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WIV entry

There are 2 chains in PDB entry 6WIV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 48GLY 747
B
 PRO 54THR 749
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 48 helices in PDB entry 6WIV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
67 85Right-handed alpha
Helix 2
AA2
A
104 117Right-handed alpha
Helix 3
AA3
A
129 140Right-handed alpha
Helix 4
AA4
A
141 143Right-handed 310
Helix 5
AA5
A
154 159Right-handed 310
Helix 6
AA6
A
172 174Right-handed 310
Helix 7
AA7
A
175 188Right-handed alpha
Helix 8
AA8
A
199 216Right-handed alpha
Helix 9
AA9
A
230 241Right-handed alpha
Helix 10
AB1
A
250 265Right-handed alpha
Helix 11
AB2
A
282 286Right-handed 310
Helix 12
AB3
A
294 303Right-handed alpha
Helix 13
AB4
A
325 337Right-handed alpha
Helix 14
AB5
A
349 368Right-handed alpha
Helix 15
AB6
A
377 381Right-handed 310
Helix 16
AB7
A
386 398Right-handed alpha
Helix 17
AB8
A
471 499Right-handed alpha
Helix 18
AB9
A
502 508Right-handed alpha
Helix 19
AC1
A
509 526Right-handed alpha
Helix 20
AC2
A
526 532Right-handed alpha
Helix 21
AC3
A
533 576Right-handed alpha
Helix 22
AC4
A
589 615Right-handed alpha
Helix 23
AC5
A
648 674Right-handed alpha
Helix 24
AC6
A
684 709Right-handed alpha
Helix 25
AC7
A
712 747Right-handed alpha
Helix 26
AC8
B
70 77Right-handed alpha
Helix 27
AC9
B
77 92Right-handed alpha
Helix 28
AD1
B
109 124Right-handed alpha
Helix 29
AD2
B
135 146Right-handed alpha
Helix 30
AD3
B
147 149Right-handed 310
Helix 31
AD4
B
160 165Right-handed 310
Helix 32
AD5
B
178 180Right-handed 310
Helix 33
AD6
B
181 194Right-handed alpha
Helix 34
AD7
B
205 220Right-handed alpha
Helix 35
AD8
B
236 246Right-handed alpha
Helix 36
AD9
B
256 270Right-handed alpha
Helix 37
AE1
B
304 312Right-handed alpha
Helix 38
AE2
B
334 346Right-handed alpha
Helix 39
AE3
B
354 376Right-handed alpha
Helix 40
AE4
B
392 405Right-handed alpha
Helix 41
AE5
B
478 506Right-handed alpha
Helix 42
AE6
B
509 515Right-handed alpha
Helix 43
AE7
B
516 537Right-handed alpha
Helix 44
AE8
B
545 584Right-handed alpha
Helix 45
AE9
B
596 619Right-handed alpha
Helix 46
AF1
B
652 679Right-handed alpha
Helix 47
AF2
B
688 712Right-handed alpha
Helix 48
AF3
B
716 748Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 6WIV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 100first strand
Strand 2
A
51 59parallel
Strand 3
A
122 127parallel
Strand 4
A
146 149parallel
Strand 5
A
166 168parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 226first strand
Strand 2
A
191 197parallel
Strand 3
A
244 248parallel
Strand 4
A
272 276parallel
Strand 5
A
306 310parallel
Strand 6
A
419 426anti-parallel
Strand 7
A
429 437anti-parallel
Strand 8
A
442 445anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 403first strand
Strand 2
A
406 409anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 468first strand
Strand 2
A
637 641parallel
Strand 3
A
622 623anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 104first strand
Strand 2
B
55 61parallel
Strand 3
B
129 132parallel
Strand 4
B
153 155parallel
Strand 5
B
172 174parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 232first strand
Strand 2
B
197 203parallel
Strand 3
B
250 254parallel
Strand 4
B
278 282parallel
Strand 5
B
315 319parallel
Strand 6
B
425 432anti-parallel
Strand 7
B
435 443anti-parallel
Strand 8
B
448 451anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 410first strand
Strand 2
B
413 418anti-parallel
Strand 3
B
421 422anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
622 627first strand
Strand 2
B
644 649anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il