Analysis of interatomic Contacts of Structural Units in PDB entry:
6WJH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WJH entry

There are 4 chains in PDB entry 6WJH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 680	GLU 1424
B	ASP 680	ARG 1423
C	ASP 680	GLY 1426
D	ASP 680	GLY 1426

There are 58 helices in PDB entry 6WJH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	681	694	Right-handed alpha
Helix 2	AA2	A	1220	1239	Right-handed alpha
Helix 3	AA3	A	1245	1252	Right-handed alpha
Helix 4	AA4	A	1253	1258	Right-handed 310
Helix 5	AA5	A	1259	1276	Right-handed alpha
Helix 6	AA6	A	1295	1297	Right-handed 310
Helix 7	AA7	A	1311	1325	Right-handed alpha
Helix 8	AA8	A	1331	1339	Right-handed alpha
Helix 9	AA9	A	1340	1342	Right-handed 310
Helix 10	AB1	A	1354	1361	Right-handed alpha
Helix 11	AB2	A	1361	1366	Right-handed alpha
Helix 12	AB3	A	1387	1394	Right-handed alpha
Helix 13	AB4	A	1395	1407	Right-handed alpha
Helix 14	AB5	A	1410	1413	Right-handed 310
Helix 15	AB6	A	1414	1423	Right-handed alpha
Helix 16	AB7	B	681	693	Right-handed alpha
Helix 17	AB8	B	1220	1239	Right-handed alpha
Helix 18	AB9	B	1245	1252	Right-handed alpha
Helix 19	AC1	B	1253	1258	Right-handed 310
Helix 20	AC2	B	1259	1276	Right-handed alpha
Helix 21	AC3	B	1295	1297	Right-handed 310
Helix 22	AC4	B	1311	1325	Right-handed alpha
Helix 23	AC5	B	1331	1339	Right-handed alpha
Helix 24	AC6	B	1340	1342	Right-handed 310
Helix 25	AC7	B	1354	1361	Right-handed alpha
Helix 26	AC8	B	1361	1366	Right-handed alpha
Helix 27	AC9	B	1387	1394	Right-handed alpha
Helix 28	AD1	B	1395	1406	Right-handed alpha
Helix 29	AD2	B	1410	1413	Right-handed 310
Helix 30	AD3	B	1414	1423	Right-handed alpha
Helix 31	AD4	C	681	693	Right-handed alpha
Helix 32	AD5	C	1222	1239	Right-handed alpha
Helix 33	AD6	C	1245	1251	Right-handed alpha
Helix 34	AD7	C	1256	1258	Right-handed 310
Helix 35	AD8	C	1259	1276	Right-handed alpha
Helix 36	AD9	C	1295	1297	Right-handed 310
Helix 37	AE1	C	1311	1325	Right-handed alpha
Helix 38	AE2	C	1331	1340	Right-handed alpha
Helix 39	AE3	C	1354	1361	Right-handed alpha
Helix 40	AE4	C	1361	1366	Right-handed alpha
Helix 41	AE5	C	1387	1394	Right-handed alpha
Helix 42	AE6	C	1395	1407	Right-handed alpha
Helix 43	AE7	C	1410	1413	Right-handed 310
Helix 44	AE8	C	1414	1426	Right-handed alpha
Helix 45	AE9	D	681	693	Right-handed alpha
Helix 46	AF1	D	1223	1239	Right-handed alpha
Helix 47	AF2	D	1245	1251	Right-handed alpha
Helix 48	AF3	D	1256	1258	Right-handed 310
Helix 49	AF4	D	1259	1276	Right-handed alpha
Helix 50	AF5	D	1295	1297	Right-handed 310
Helix 51	AF6	D	1311	1325	Right-handed alpha
Helix 52	AF7	D	1331	1340	Right-handed alpha
Helix 53	AF8	D	1354	1361	Right-handed alpha
Helix 54	AF9	D	1361	1366	Right-handed alpha
Helix 55	AG1	D	1387	1394	Right-handed alpha
Helix 56	AG2	D	1395	1407	Right-handed alpha
Helix 57	AG3	D	1410	1413	Right-handed 310
Helix 58	AG4	D	1414	1426	Right-handed alpha

There are 8 sheets in PDB entry 6WJH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1243	1244	first strand
Strand 2	A	1288	1293	anti-parallel
Strand 3	A	1277	1283	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1329	1330	first strand
Strand 2	A	1382	1386	anti-parallel
Strand 3	A	1369	1373	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1243	1244	first strand
Strand 2	B	1288	1293	anti-parallel
Strand 3	B	1277	1283	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1329	1330	first strand
Strand 2	B	1382	1386	anti-parallel
Strand 3	B	1369	1373	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1243	1244	first strand
Strand 2	C	1288	1293	anti-parallel
Strand 3	C	1277	1283	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1329	1330	first strand
Strand 2	C	1382	1386	anti-parallel
Strand 3	C	1369	1373	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1243	1244	first strand
Strand 2	D	1288	1293	anti-parallel
Strand 3	D	1277	1283	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1329	1330	first strand
Strand 2	D	1382	1386	anti-parallel
Strand 3	D	1369	1373	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WJH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WJH