Analysis of interatomic Contacts of Structural Units in PDB entry:
6WJV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WJV entry

There are 4 chains in PDB entry 6WJV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 31	THR 2221
2	PHE 170	TYR 688
3	ALA 9	GLN 93
4	SER 18	GLN 124

There are 71 helices in PDB entry 6WJV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	48	Right-handed alpha
Helix 2	AA2	A	148	160	Right-handed alpha
Helix 3	AA3	A	179	183	Right-handed 310
Helix 4	AA4	A	195	214	Right-handed alpha
Helix 5	AA5	A	248	257	Right-handed alpha
Helix 6	AA6	A	354	370	Right-handed alpha
Helix 7	AA7	A	383	394	Right-handed alpha
Helix 8	AA8	A	397	401	Right-handed 310
Helix 9	AA9	A	422	427	Right-handed alpha
Helix 10	AB1	A	438	446	Right-handed alpha
Helix 11	AB2	A	455	459	Right-handed 310
Helix 12	AB3	A	460	465	Right-handed alpha
Helix 13	AB4	A	466	498	Right-handed alpha
Helix 14	AB5	A	503	510	Right-handed alpha
Helix 15	AB6	A	511	527	Right-handed alpha
Helix 16	AB7	A	577	585	Right-handed alpha
Helix 17	AB8	A	587	599	Right-handed alpha
Helix 18	AB9	A	609	627	Right-handed alpha
Helix 19	AC1	A	643	653	Right-handed alpha
Helix 20	AC2	A	693	705	Right-handed alpha
Helix 21	AC3	A	728	746	Right-handed alpha
Helix 22	AC4	A	768	799	Right-handed alpha
Helix 23	AC5	A	809	834	Right-handed alpha
Helix 24	AC6	A	843	867	Right-handed alpha
Helix 25	AC7	A	905	918	Right-handed alpha
Helix 26	AC8	A	992	1007	Right-handed alpha
Helix 27	AC9	A	1011	1032	Right-handed alpha
Helix 28	AD1	A	1039	1047	Right-handed alpha
Helix 29	AD2	A	1056	1060	Right-handed 310
Helix 30	AD3	A	1064	1077	Right-handed alpha
Helix 31	AD4	A	1101	1104	Right-handed 310
Helix 32	AD5	A	1110	1112	Right-handed 310
Helix 33	AD6	A	1115	1128	Right-handed alpha
Helix 34	AD7	A	1136	1141	Right-handed alpha
Helix 35	AD8	A	1142	1158	Right-handed alpha
Helix 36	AD9	A	1177	1182	Right-handed alpha
Helix 37	AE1	A	1272	1294	Right-handed alpha
Helix 38	AE2	A	1298	1302	Right-handed 310
Helix 39	AE3	A	1310	1316	Right-handed alpha
Helix 40	AE4	A	1454	1462	Right-handed alpha
Helix 41	AE5	A	1525	1546	Right-handed alpha
Helix 42	AE6	A	1566	1584	Right-handed alpha
Helix 43	AE7	A	1635	1656	Right-handed alpha
Helix 44	AE8	A	1669	1683	Right-handed alpha
Helix 45	AE9	A	1704	1709	Right-handed alpha
Helix 46	AF1	A	1740	1745	Right-handed alpha
Helix 47	AF2	A	1785	1802	Right-handed alpha
Helix 48	AF3	A	1810	1820	Right-handed alpha
Helix 49	AF4	A	1831	1847	Right-handed alpha
Helix 50	AF5	A	1878	1892	Right-handed alpha
Helix 51	AF6	A	1948	1975	Right-handed alpha
Helix 52	AF7	A	1995	2022	Right-handed alpha
Helix 53	AF8	A	2027	2033	Right-handed alpha
Helix 54	AF9	A	2048	2055	Right-handed alpha
Helix 55	AG1	A	2139	2158	Right-handed alpha
Helix 56	AG2	A	2190	2208	Right-handed alpha
Helix 57	AG3	A	2210	2220	Right-handed alpha
Helix 58	AG4	2	210	224	Right-handed alpha
Helix 59	AG5	2	225	229	Right-handed 310
Helix 60	AG6	2	351	356	Right-handed alpha
Helix 61	AG7	2	385	394	Right-handed alpha
Helix 62	AG8	2	410	426	Right-handed alpha
Helix 63	AG9	2	455	470	Right-handed alpha
Helix 64	AH1	2	545	550	Right-handed alpha
Helix 65	AH2	3	13	20	Right-handed alpha
Helix 66	AH3	3	33	53	Right-handed alpha
Helix 67	AH4	3	70	81	Right-handed alpha
Helix 68	AH5	4	35	41	Right-handed alpha
Helix 69	AH6	4	56	83	Right-handed alpha
Helix 70	AH7	4	91	96	Right-handed alpha
Helix 71	AH8	4	104	122	Right-handed alpha

There are 22 sheets in PDB entry 6WJV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	264	268	anti-parallel
Strand 3	A	271	274	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	86	first strand
Strand 2	A	115	120	anti-parallel
Strand 3	A	130	131	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	172	first strand
Strand 2	A	186	192	anti-parallel
Strand 3	A	140	143	anti-parallel
Strand 4	A	239	243	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	286	288	first strand
Strand 2	A	373	376	parallel
Strand 3	A	420	421	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	293	first strand
Strand 2	A	308	315	anti-parallel
Strand 3	A	318	324	anti-parallel
Strand 4	A	346	352	parallel
Strand 5	A	335	336	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	543	first strand
Strand 2	A	546	547	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	552	553	first strand
Strand 2	A	679	689	anti-parallel
Strand 3	A	752	762	anti-parallel
Strand 4	A	659	660	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	559	560	first strand
Strand 2	A	870	874	anti-parallel
Strand 3	A	879	883	anti-parallel
Strand 4	A	635	638	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	564	567	first strand
Strand 2	A	952	955	anti-parallel
Strand 3	A	969	972	anti-parallel
Strand 4	A	978	982	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	572	573	first strand
Strand 2	A	631	632	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	710	first strand
Strand 2	A	720	721	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	890	894	first strand
Strand 2	A	900	904	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	920	926	first strand
Strand 2	A	934	939	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1091	1093	first strand
Strand 2	A	1106	1108	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1445	1446	first strand
Strand 2	A	1320	1322	anti-parallel
Strand 3	A	1335	1341	anti-parallel
Strand 4	A	1346	1352	anti-parallel
Strand 5	A	1463	1464	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1500	1503	first strand
Strand 2	A	1483	1488	anti-parallel
Strand 3	A	1588	1590	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1512	1513	first strand
Strand 2	A	1561	1562	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	284	287	first strand
Strand 2	2	325	329	anti-parallel
Strand 3	2	343	345	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	296	300	first strand
Strand 2	2	303	307	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	399	400	first strand
Strand 2	2	673	676	anti-parallel
Strand 3	2	681	684	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	481	483	first strand
Strand 2	2	523	525	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	541	543	first strand
Strand 2	2	638	642	parallel
Strand 3	2	657	659	parallel
Strand 4	2	650	651	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WJV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WJV