Analysis of interatomic Contacts of Structural Units in PDB entry:
6WKF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WKF entry

There are 2 chains in PDB entry 6WKF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 10HIS 309
B
 PHE 7SER 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 6WKF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 25Right-handed alpha
Helix 2
AA2
A
27 33Right-handed alpha
Helix 3
AA3
A
38 47Right-handed alpha
Helix 4
AA4
A
49 58Right-handed alpha
Helix 5
AA5
A
62 82Right-handed alpha
Helix 6
AA6
A
83 84Right-handed 310
Helix 7
AA7
A
86 89Right-handed 310
Helix 8
AA8
A
90 103Right-handed alpha
Helix 9
AA9
A
104 106Right-handed 310
Helix 10
AB1
A
114 129Right-handed alpha
Helix 11
AB2
A
132 156Right-handed alpha
Helix 12
AB3
A
169 177Right-handed alpha
Helix 13
AB4
A
178 191Right-handed alpha
Helix 14
AB5
A
195 200Right-handed alpha
Helix 15
AB6
A
201 223Right-handed alpha
Helix 16
AB7
A
254 272Right-handed alpha
Helix 17
AB8
A
272 280Right-handed alpha
Helix 18
AB9
A
283 297Right-handed alpha
Helix 19
AC1
A
297 309Right-handed alpha
Helix 20
AC2
B
18 25Right-handed alpha
Helix 21
AC3
B
27 33Right-handed alpha
Helix 22
AC4
B
38 48Right-handed alpha
Helix 23
AC5
B
49 58Right-handed alpha
Helix 24
AC6
B
62 82Right-handed alpha
Helix 25
AC7
B
83 84Right-handed 310
Helix 26
AC8
B
85 89Right-handed 310
Helix 27
AC9
B
90 107Right-handed alpha
Helix 28
AD1
B
114 128Right-handed alpha
Helix 29
AD2
B
136 159Right-handed alpha
Helix 30
AD3
B
165 177Right-handed alpha
Helix 31
AD4
B
178 190Right-handed alpha
Helix 32
AD5
B
195 200Right-handed alpha
Helix 33
AD6
B
201 223Right-handed alpha
Helix 34
AD7
B
223 230Right-handed alpha
Helix 35
AD8
B
235 245Right-handed alpha
Helix 36
AD9
B
247 280Right-handed alpha
Helix 37
AE1
B
283 297Right-handed alpha
Helix 38
AE2
B
297 311Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6WKF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il