Analysis of interatomic Contacts of Structural Units in PDB entry:
6WKN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WKN entry

There are 4 chains in PDB entry 6WKN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 75PRO 729
B
 PHE 75PRO 729
C
 PHE 75PRO 729
D
 PHE 75PRO 729
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 6WKN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 87Right-handed alpha
Helix 2
AA2
A
94 103Right-handed alpha
Helix 3
AA3
A
119 127Right-handed alpha
Helix 4
AA4
A
135 145Right-handed alpha
Helix 5
AA5
A
166 174Right-handed alpha
Helix 6
AA6
A
176 185Right-handed alpha
Helix 7
AA7
A
212 219Right-handed alpha
Helix 8
AA8
A
223 231Right-handed alpha
Helix 9
AA9
A
248 256Right-handed alpha
Helix 10
AB1
A
260 282Right-handed alpha
Helix 11
AB2
A
297 305Right-handed alpha
Helix 12
AB3
A
307 316Right-handed alpha
Helix 13
AB4
A
323 327Right-handed 310
Helix 14
AB5
A
355 363Right-handed alpha
Helix 15
AB6
A
368 373Right-handed alpha
Helix 16
AB7
A
375 413Right-handed alpha
Helix 17
AB8
A
430 459Right-handed alpha
Helix 18
AB9
A
470 492Right-handed alpha
Helix 19
AC1
A
496 512Right-handed alpha
Helix 20
AC2
A
513 517Right-handed 310
Helix 21
AC3
A
519 559Right-handed alpha
Helix 22
AC4
A
592 602Right-handed alpha
Helix 23
AC5
A
619 650Right-handed alpha
Helix 24
AC6
A
652 673Right-handed alpha
Helix 25
AC7
B
76 87Right-handed alpha
Helix 26
AC8
B
94 103Right-handed alpha
Helix 27
AC9
B
119 127Right-handed alpha
Helix 28
AD1
B
135 145Right-handed alpha
Helix 29
AD2
B
166 174Right-handed alpha
Helix 30
AD3
B
176 185Right-handed alpha
Helix 31
AD4
B
212 219Right-handed alpha
Helix 32
AD5
B
223 231Right-handed alpha
Helix 33
AD6
B
248 256Right-handed alpha
Helix 34
AD7
B
260 282Right-handed alpha
Helix 35
AD8
B
297 305Right-handed alpha
Helix 36
AD9
B
307 316Right-handed alpha
Helix 37
AE1
B
323 327Right-handed 310
Helix 38
AE2
B
355 363Right-handed alpha
Helix 39
AE3
B
368 373Right-handed alpha
Helix 40
AE4
B
375 413Right-handed alpha
Helix 41
AE5
B
430 459Right-handed alpha
Helix 42
AE6
B
470 492Right-handed alpha
Helix 43
AE7
B
496 512Right-handed alpha
Helix 44
AE8
B
513 517Right-handed 310
Helix 45
AE9
B
519 559Right-handed alpha
Helix 46
AF1
B
592 602Right-handed alpha
Helix 47
AF2
B
619 650Right-handed alpha
Helix 48
AF3
B
652 673Right-handed alpha
Helix 49
AF4
C
76 87Right-handed alpha
Helix 50
AF5
C
94 103Right-handed alpha
Helix 51
AF6
C
119 127Right-handed alpha
Helix 52
AF7
C
135 145Right-handed alpha
Helix 53
AF8
C
166 174Right-handed alpha
Helix 54
AF9
C
176 185Right-handed alpha
Helix 55
AG1
C
212 219Right-handed alpha
Helix 56
AG2
C
223 231Right-handed alpha
Helix 57
AG3
C
248 256Right-handed alpha
Helix 58
AG4
C
260 282Right-handed alpha
Helix 59
AG5
C
297 305Right-handed alpha
Helix 60
AG6
C
307 316Right-handed alpha
Helix 61
AG7
C
323 327Right-handed 310
Helix 62
AG8
C
355 363Right-handed alpha
Helix 63
AG9
C
368 373Right-handed alpha
Helix 64
AH1
C
375 413Right-handed alpha
Helix 65
AH2
C
430 459Right-handed alpha
Helix 66
AH3
C
470 492Right-handed alpha
Helix 67
AH4
C
496 512Right-handed alpha
Helix 68
AH5
C
513 517Right-handed 310
Helix 69
AH6
C
519 559Right-handed alpha
Helix 70
AH7
C
592 602Right-handed alpha
Helix 71
AH8
C
619 650Right-handed alpha
Helix 72
AH9
C
652 673Right-handed alpha
Helix 73
AI1
D
76 87Right-handed alpha
Helix 74
AI2
D
94 103Right-handed alpha
Helix 75
AI3
D
119 127Right-handed alpha
Helix 76
AI4
D
135 145Right-handed alpha
Helix 77
AI5
D
166 174Right-handed alpha
Helix 78
AI6
D
176 185Right-handed alpha
Helix 79
AI7
D
212 219Right-handed alpha
Helix 80
AI8
D
223 231Right-handed alpha
Helix 81
AI9
D
248 256Right-handed alpha
Helix 82
AJ1
D
260 282Right-handed alpha
Helix 83
AJ2
D
297 305Right-handed alpha
Helix 84
AJ3
D
307 316Right-handed alpha
Helix 85
AJ4
D
323 327Right-handed 310
Helix 86
AJ5
D
355 363Right-handed alpha
Helix 87
AJ6
D
368 373Right-handed alpha
Helix 88
AJ7
D
375 413Right-handed alpha
Helix 89
AJ8
D
430 459Right-handed alpha
Helix 90
AJ9
D
470 492Right-handed alpha
Helix 91
AK1
D
496 512Right-handed alpha
Helix 92
AK2
D
513 517Right-handed 310
Helix 93
AK3
D
519 559Right-handed alpha
Helix 94
AK4
D
592 602Right-handed alpha
Helix 95
AK5
D
619 650Right-handed alpha
Helix 96
AK6
D
652 673Right-handed alpha
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There are 4 sheets in PDB entry 6WKN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 335first strand
Strand 2
A
338 344anti-parallel
Strand 3
A
700 710anti-parallel
Strand 4
A
687 692anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 335first strand
Strand 2
B
338 344anti-parallel
Strand 3
B
700 710anti-parallel
Strand 4
B
687 692anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
329 335first strand
Strand 2
C
338 344anti-parallel
Strand 3
C
700 710anti-parallel
Strand 4
C
687 692anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
329 335first strand
Strand 2
D
338 344anti-parallel
Strand 3
D
700 710anti-parallel
Strand 4
D
687 692anti-parallel
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