Analysis of interatomic Contacts of Structural Units in PDB entry:
6WKZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WKZ entry

There are 2 chains in PDB entry 6WKZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 28MET 363
B
 SER 28MET 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6WKZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 39Right-handed 310
Helix 2
AA2
A
41 49Right-handed alpha
Helix 3
AA3
A
50 52Right-handed 310
Helix 4
AA4
A
53 75Right-handed alpha
Helix 5
AA5
A
104 110Right-handed alpha
Helix 6
AA6
A
111 122Right-handed alpha
Helix 7
AA7
A
135 144Right-handed alpha
Helix 8
AA8
A
173 198Right-handed alpha
Helix 9
AA9
A
202 215Right-handed alpha
Helix 10
AB1
A
219 227Right-handed alpha
Helix 11
AB2
A
239 252Right-handed alpha
Helix 12
AB3
A
259 272Right-handed alpha
Helix 13
AB4
A
342 354Right-handed alpha
Helix 14
AB5
A
355 363Right-handed 310
Helix 15
AB6
B
35 39Right-handed 310
Helix 16
AB7
B
41 53Right-handed alpha
Helix 17
AB8
B
53 75Right-handed alpha
Helix 18
AB9
B
104 110Right-handed alpha
Helix 19
AC1
B
111 122Right-handed alpha
Helix 20
AC2
B
135 144Right-handed alpha
Helix 21
AC3
B
173 197Right-handed alpha
Helix 22
AC4
B
202 215Right-handed alpha
Helix 23
AC5
B
219 227Right-handed alpha
Helix 24
AC6
B
239 252Right-handed alpha
Helix 25
AC7
B
259 272Right-handed alpha
Helix 26
AC8
B
342 354Right-handed alpha
Helix 27
AC9
B
355 363Right-handed 310
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There are 4 sheets in PDB entry 6WKZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 232first strand
Strand 2
A
127 130parallel
Strand 3
A
98 103parallel
Strand 4
A
276 281parallel
Strand 5
A
302 307parallel
Strand 6
A
337 340parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
169 172anti-parallel
Strand 3
A
163 166anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 232first strand
Strand 2
B
127 130parallel
Strand 3
B
98 103parallel
Strand 4
B
276 281parallel
Strand 5
B
302 307parallel
Strand 6
B
337 340parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 148first strand
Strand 2
B
169 172anti-parallel
Strand 3
B
163 166anti-parallel
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