Analysis of interatomic Contacts of Structural Units in PDB entry:
6WLF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WLF entry

There are 2 chains in PDB entry 6WLF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 9LEU 454
B
 THR 9LEU 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6WLF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 16Right-handed alpha
Helix 2
AA2
A
22 27Right-handed alpha
Helix 3
AA3
A
31 34Right-handed 310
Helix 4
AA4
A
35 47Right-handed alpha
Helix 5
AA5
A
63 70Right-handed alpha
Helix 6
AA6
A
82 93Right-handed alpha
Helix 7
AA7
A
105 109Right-handed 310
Helix 8
AA8
A
124 128Right-handed 310
Helix 9
AA9
A
129 143Right-handed alpha
Helix 10
AB1
A
182 193Right-handed alpha
Helix 11
AB2
A
213 221Right-handed alpha
Helix 12
AB3
A
242 265Right-handed alpha
Helix 13
AB4
A
271 280Right-handed alpha
Helix 14
AB5
A
306 315Right-handed alpha
Helix 15
AB6
A
324 339Right-handed alpha
Helix 16
AB7
A
350 361Right-handed alpha
Helix 17
AB8
A
378 385Right-handed alpha
Helix 18
AB9
A
403 409Right-handed alpha
Helix 19
AC1
A
426 429Right-handed 310
Helix 20
AC2
B
10 16Right-handed alpha
Helix 21
AC3
B
22 27Right-handed alpha
Helix 22
AC4
B
31 34Right-handed 310
Helix 23
AC5
B
35 47Right-handed alpha
Helix 24
AC6
B
63 73Right-handed alpha
Helix 25
AC7
B
82 93Right-handed alpha
Helix 26
AC8
B
124 128Right-handed 310
Helix 27
AC9
B
129 143Right-handed alpha
Helix 28
AD1
B
182 193Right-handed alpha
Helix 29
AD2
B
213 221Right-handed alpha
Helix 30
AD3
B
242 265Right-handed alpha
Helix 31
AD4
B
271 280Right-handed alpha
Helix 32
AD5
B
306 315Right-handed alpha
Helix 33
AD6
B
324 339Right-handed alpha
Helix 34
AD7
B
350 361Right-handed alpha
Helix 35
AD8
B
372 377Right-handed alpha
Helix 36
AD9
B
378 384Right-handed alpha
Helix 37
AE1
B
385 387Right-handed 310
Helix 38
AE2
B
403 411Right-handed alpha
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There are 4 sheets in PDB entry 6WLF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 103first strand
Strand 2
A
75 80parallel
Strand 3
A
54 58parallel
Strand 4
A
116 120parallel
Strand 5
A
144 155parallel
Strand 6
A
225 234anti-parallel
Strand 7
A
202 212anti-parallel
Strand 8
A
195 196anti-parallel
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There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 103first strand
Strand 2
A
75 80parallel
Strand 3
A
54 58parallel
Strand 4
A
116 120parallel
Strand 5
A
144 155parallel
Strand 6
A
225 234anti-parallel
Strand 7
A
202 212anti-parallel
Strand 8
A
343 347anti-parallel
Strand 9
A
318 322parallel
Strand 10
A
291 295parallel
Strand 11
A
365 371parallel
Strand 12
A
389 401parallel
Strand 13
A
445 453anti-parallel
Strand 14
A
417 424anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 103first strand
Strand 2
B
75 80parallel
Strand 3
B
54 58parallel
Strand 4
B
116 120parallel
Strand 5
B
144 155parallel
Strand 6
B
225 234anti-parallel
Strand 7
B
202 212anti-parallel
Strand 8
B
195 196anti-parallel
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There are 14 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 103first strand
Strand 2
B
75 80parallel
Strand 3
B
54 58parallel
Strand 4
B
116 120parallel
Strand 5
B
144 155parallel
Strand 6
B
225 234anti-parallel
Strand 7
B
202 212anti-parallel
Strand 8
B
343 347anti-parallel
Strand 9
B
318 322parallel
Strand 10
B
291 294parallel
Strand 11
B
365 371parallel
Strand 12
B
389 401parallel
Strand 13
B
445 453anti-parallel
Strand 14
B
417 424anti-parallel
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