Analysis of interatomic Contacts of Structural Units in PDB entry:
6WLW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WLW entry

There are 16 chains in PDB entry 6WLW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
0
 MET 1GLY 204
1
 SER 6LYS 155
2
 SER 6LYS 155
3
 SER 6LYS 155
4
 SER 6LYS 155
5
 SER 6LYS 155
6
 SER 6LYS 155
7
 SER 6LYS 155
8
 SER 6LYS 155
9
 SER 6LYS 155
Q
 SER 2PHE 351
R
 PRO 361GLU 832
S
 HIS 4TRP 80
T
 CYS 45ASN 129
U
 ILE 254ASP 458
V
 SER 291TYR 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are121 helices in PDB entry 6WLW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
0
2 29Right-handed alpha
Helix 2
AA2
0
31 35Right-handed 310
Helix 3
AA3
0
36 44Right-handed alpha
Helix 4
AA4
0
45 80Right-handed alpha
Helix 5
AA5
0
81 82Right-handed 310
Helix 6
AA6
0
83 84Right-handed 310
Helix 7
AA7
0
85 90Right-handed alpha
Helix 8
AA8
0
90 112Right-handed alpha
Helix 9
AA9
0
122 169Right-handed alpha
Helix 10
AB1
0
172 198Right-handed alpha
Helix 11
AB2
1
8 11Right-handed 310
Helix 12
AB3
1
12 46Right-handed alpha
Helix 13
AB4
1
47 52Right-handed 310
Helix 14
AB5
1
53 55Right-handed 310
Helix 15
AB6
1
56 77Right-handed alpha
Helix 16
AB7
1
85 124Right-handed alpha
Helix 17
AB8
1
127 138Right-handed alpha
Helix 18
AB9
1
139 153Right-handed alpha
Helix 19
AC1
2
8 10Right-handed 310
Helix 20
AC2
2
11 45Right-handed alpha
Helix 21
AC3
2
46 47Right-handed 310
Helix 22
AC4
2
48 52Right-handed 310
Helix 23
AC5
2
56 77Right-handed alpha
Helix 24
AC6
2
85 122Right-handed alpha
Helix 25
AC7
2
124 126Right-handed 310
Helix 26
AC8
2
127 154Right-handed alpha
Helix 27
AC9
3
8 11Right-handed 310
Helix 28
AD1
3
12 44Right-handed alpha
Helix 29
AD2
3
56 79Right-handed alpha
Helix 30
AD3
3
85 119Right-handed alpha
Helix 31
AD4
3
124 126Right-handed 310
Helix 32
AD5
3
127 154Right-handed alpha
Helix 33
AD6
4
11 45Right-handed alpha
Helix 34
AD7
4
48 55Right-handed 310
Helix 35
AD8
4
56 78Right-handed alpha
Helix 36
AD9
4
85 122Right-handed alpha
Helix 37
AE1
4
124 126Right-handed 310
Helix 38
AE2
4
127 154Right-handed alpha
Helix 39
AE3
5
8 11Right-handed 310
Helix 40
AE4
5
12 44Right-handed alpha
Helix 41
AE5
5
48 52Right-handed 310
Helix 42
AE6
5
56 77Right-handed alpha
Helix 43
AE7
5
85 122Right-handed alpha
Helix 44
AE8
5
126 154Right-handed alpha
Helix 45
AE9
6
8 10Right-handed 310
Helix 46
AF1
6
11 45Right-handed alpha
Helix 47
AF2
6
48 52Right-handed 310
Helix 48
AF3
6
56 77Right-handed alpha
Helix 49
AF4
6
85 121Right-handed alpha
Helix 50
AF5
6
127 154Right-handed alpha
Helix 51
AF6
7
11 45Right-handed alpha
Helix 52
AF7
7
46 47Right-handed 310
Helix 53
AF8
7
48 52Right-handed 310
Helix 54
AF9
7
53 55Right-handed 310
Helix 55
AG1
7
56 77Right-handed alpha
Helix 56
AG2
7
85 121Right-handed alpha
Helix 57
AG3
7
124 126Right-handed 310
Helix 58
AG4
7
127 154Right-handed alpha
Helix 59
AG5
8
8 10Right-handed 310
Helix 60
AG6
8
11 44Right-handed alpha
Helix 61
AG7
8
48 52Right-handed 310
Helix 62
AG8
8
56 77Right-handed alpha
Helix 63
AG9
8
85 122Right-handed alpha
Helix 64
AH1
8
126 154Right-handed alpha
Helix 65
AH2
9
11 45Right-handed alpha
Helix 66
AH3
9
56 77Right-handed alpha
Helix 67
AH4
9
85 124Right-handed alpha
Helix 68
AH5
9
127 154Right-handed alpha
Helix 69
AH6
Q
8 12Right-handed 310
Helix 70
AH7
Q
15 25Right-handed alpha
Helix 71
AH8
Q
29 34Right-handed alpha
Helix 72
AH9
Q
41 49Right-handed alpha
Helix 73
AI1
Q
66 86Right-handed alpha
Helix 74
AI2
Q
90 100Right-handed alpha
Helix 75
AI3
Q
105 117Right-handed alpha
Helix 76
AI4
Q
121 125Right-handed 310
Helix 77
AI5
Q
146 157Right-handed alpha
Helix 78
AI6
Q
160 165Right-handed alpha
Helix 79
AI7
Q
171 176Right-handed alpha
Helix 80
AI8
Q
177 198Right-handed alpha
Helix 81
AI9
Q
208 226Right-handed alpha
Helix 82
AJ1
Q
233 238Right-handed alpha
Helix 83
AJ2
Q
247 252Right-handed alpha
Helix 84
AJ3
Q
263 268Right-handed alpha
Helix 85
AJ4
Q
271 278Right-handed alpha
Helix 86
AJ5
Q
293 304Right-handed alpha
Helix 87
AJ6
Q
305 307Right-handed 310
Helix 88
AJ7
Q
312 326Right-handed alpha
Helix 89
AJ8
Q
328 337Right-handed alpha
Helix 90
AJ9
R
371 379Right-handed alpha
Helix 91
AK1
R
391 406Right-handed alpha
Helix 92
AK2
R
409 426Right-handed alpha
Helix 93
AK3
R
426 432Right-handed alpha
Helix 94
AK4
R
437 446Right-handed alpha
Helix 95
AK5
R
446 465Right-handed alpha
Helix 96
AK6
R
483 488Right-handed alpha
Helix 97
AK7
R
490 497Right-handed alpha
Helix 98
AK8
R
519 524Right-handed 310
Helix 99
AK9
R
527 554Right-handed alpha
Helix 100
AL1
R
555 562Right-handed alpha
Helix 101
AL2
R
564 568Right-handed 310
Helix 102
AL3
R
571 583Right-handed alpha
Helix 103
AL4
R
583 597Right-handed alpha
Helix 104
AL5
R
607 617Right-handed alpha
Helix 105
AL6
R
631 650Right-handed alpha
Helix 106
AL7
R
652 666Right-handed alpha
Helix 107
AL8
R
712 737Right-handed alpha
Helix 108
AL9
R
739 758Right-handed alpha
Helix 109
AM1
R
767 790Right-handed alpha
Helix 110
AM2
R
792 808Right-handed alpha
Helix 111
AM3
R
810 814Right-handed 310
Helix 112
AM4
S
6 23Right-handed alpha
Helix 113
AM5
S
24 27Right-handed 310
Helix 114
AM6
S
33 58Right-handed alpha
Helix 115
AM7
S
70 80Right-handed alpha
Helix 116
AM8
T
49 74Right-handed alpha
Helix 117
AM9
T
79 83Right-handed 310
Helix 118
AN1
T
94 128Right-handed alpha
Helix 119
AN2
U
285 290Right-handed alpha
Helix 120
AN3
U
423 449Right-handed alpha
Helix 121
AN4
V
302 330Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 6WLW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
499 501first strand
Strand 2
S
67 69anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
258 261first strand
Strand 2
U
265 270anti-parallel
Strand 3
U
393 403anti-parallel
Strand 4
U
273 278anti-parallel
Strand 5
U
282 284anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
258 261first strand
Strand 2
U
265 270anti-parallel
Strand 3
U
393 403anti-parallel
Strand 4
U
368 375anti-parallel
Strand 5
U
415 417parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
301 302first strand
Strand 2
U
306 316anti-parallel
Strand 3
U
319 332anti-parallel
Strand 4
U
337 348anti-parallel
Strand 5
U
362 363anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
301 302first strand
Strand 2
U
306 316anti-parallel
Strand 3
U
319 332anti-parallel
Strand 4
U
337 348anti-parallel
Strand 5
U
353 357anti-parallel
Strand 6
U
385 386anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il