Analysis of interatomic Contacts of Structural Units in PDB entry:
6WM6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WM6 entry

There is 1 chain in PDB entry 6WM6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 31HIS 566
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6WM6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 78Right-handed alpha
Helix 2
AA2
A
130 142Right-handed alpha
Helix 3
AA3
A
156 158Right-handed 310
Helix 4
AA4
A
182 186Right-handed 310
Helix 5
AA5
A
192 197Right-handed alpha
Helix 6
AA6
A
201 208Right-handed alpha
Helix 7
AA7
A
208 213Right-handed alpha
Helix 8
AA8
A
259 261Right-handed 310
Helix 9
AA9
A
262 269Right-handed alpha
Helix 10
AB1
A
281 291Right-handed alpha
Helix 11
AB2
A
292 294Right-handed 310
Helix 12
AB3
A
316 319Right-handed 310
Helix 13
AB4
A
320 331Right-handed alpha
Helix 14
AB5
A
332 341Right-handed alpha
Helix 15
AB6
A
365 370Right-handed alpha
Helix 16
AB7
A
376 387Right-handed alpha
Helix 17
AB8
A
415 430Right-handed alpha
Helix 18
AB9
A
431 433Right-handed 310
Helix 19
AC1
A
441 449Right-handed 310
Helix 20
AC2
A
466 475Right-handed alpha
Helix 21
AC3
A
488 500Right-handed alpha
Helix 22
AC4
A
503 522Right-handed alpha
Helix 23
AC5
A
551 559Right-handed 310
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There are 7 sheets in PDB entry 6WM6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 54first strand
Strand 2
A
251 256parallel
Strand 3
A
232 237anti-parallel
Strand 4
A
222 228anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
93 95anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 107first strand
Strand 2
A
112 117anti-parallel
Strand 3
A
171 176anti-parallel
Strand 4
A
160 165anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 275first strand
Strand 2
A
534 537anti-parallel
Strand 3
A
296 299anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 439first strand
Strand 2
A
407 410parallel
Strand 3
A
456 462parallel
Strand 4
A
302 311anti-parallel
Strand 5
A
524 531anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 392first strand
Strand 2
A
395 397anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
540 541first strand
Strand 2
A
560 561anti-parallel
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