Analysis of interatomic Contacts of Structural Units in PDB entry:
6WMN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WMN entry

There are 4 chains in PDB entry 6WMN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 57SER 392
B
 GLU 56CYS 397
C
 ALA 57CYS 397
D
 ALA 57HIS 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 6WMN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 70Right-handed alpha
Helix 2
AA2
A
101 106Right-handed alpha
Helix 3
AA3
A
108 112Right-handed 310
Helix 4
AA4
A
113 122Right-handed alpha
Helix 5
AA5
A
154 164Right-handed alpha
Helix 6
AA6
A
170 174Right-handed 310
Helix 7
AA7
A
186 190Right-handed 310
Helix 8
AA8
A
194 206Right-handed alpha
Helix 9
AA9
A
216 218Right-handed 310
Helix 10
AB1
A
219 235Right-handed alpha
Helix 11
AB2
A
251 261Right-handed alpha
Helix 12
AB3
A
263 269Right-handed alpha
Helix 13
AB4
A
313 324Right-handed alpha
Helix 14
AB5
A
331 343Right-handed alpha
Helix 15
AB6
A
365 370Right-handed 310
Helix 16
AB7
A
379 391Right-handed alpha
Helix 17
AB8
B
57 71Right-handed alpha
Helix 18
AB9
B
72 75Right-handed 310
Helix 19
AC1
B
101 106Right-handed alpha
Helix 20
AC2
B
108 112Right-handed 310
Helix 21
AC3
B
113 122Right-handed alpha
Helix 22
AC4
B
154 164Right-handed alpha
Helix 23
AC5
B
186 190Right-handed 310
Helix 24
AC6
B
194 206Right-handed alpha
Helix 25
AC7
B
216 218Right-handed 310
Helix 26
AC8
B
219 235Right-handed alpha
Helix 27
AC9
B
251 261Right-handed alpha
Helix 28
AD1
B
263 269Right-handed alpha
Helix 29
AD2
B
313 324Right-handed alpha
Helix 30
AD3
B
331 343Right-handed alpha
Helix 31
AD4
B
360 370Right-handed 310
Helix 32
AD5
B
379 391Right-handed alpha
Helix 33
AD6
B
392 397Right-handed alpha
Helix 34
AD7
C
58 71Right-handed alpha
Helix 35
AD8
C
101 106Right-handed alpha
Helix 36
AD9
C
108 112Right-handed 310
Helix 37
AE1
C
113 122Right-handed alpha
Helix 38
AE2
C
154 164Right-handed alpha
Helix 39
AE3
C
170 174Right-handed 310
Helix 40
AE4
C
186 190Right-handed 310
Helix 41
AE5
C
194 206Right-handed alpha
Helix 42
AE6
C
216 218Right-handed 310
Helix 43
AE7
C
219 235Right-handed alpha
Helix 44
AE8
C
251 261Right-handed alpha
Helix 45
AE9
C
263 269Right-handed alpha
Helix 46
AF1
C
313 324Right-handed alpha
Helix 47
AF2
C
331 343Right-handed alpha
Helix 48
AF3
C
359 363Right-handed 310
Helix 49
AF4
C
365 370Right-handed 310
Helix 50
AF5
C
379 391Right-handed alpha
Helix 51
AF6
C
392 397Right-handed alpha
Helix 52
AF7
D
58 71Right-handed alpha
Helix 53
AF8
D
101 106Right-handed alpha
Helix 54
AF9
D
108 112Right-handed 310
Helix 55
AG1
D
113 122Right-handed alpha
Helix 56
AG2
D
154 164Right-handed alpha
Helix 57
AG3
D
186 190Right-handed 310
Helix 58
AG4
D
194 206Right-handed alpha
Helix 59
AG5
D
216 218Right-handed 310
Helix 60
AG6
D
219 235Right-handed alpha
Helix 61
AG7
D
251 261Right-handed alpha
Helix 62
AG8
D
263 269Right-handed alpha
Helix 63
AG9
D
313 324Right-handed alpha
Helix 64
AH1
D
331 343Right-handed alpha
Helix 65
AH2
D
379 387Right-handed alpha
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There are 8 sheets in PDB entry 6WMN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
208 214anti-parallel
Strand 3
A
176 184parallel
Strand 4
A
144 149parallel
Strand 5
A
240 245parallel
Strand 6
A
303 312anti-parallel
Strand 7
A
271 276anti-parallel
Strand 8
A
348 349parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 250first strand
Strand 2
A
374 376anti-parallel
Strand 3
A
353 354parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
208 214anti-parallel
Strand 3
B
176 184parallel
Strand 4
B
144 149parallel
Strand 5
B
240 245parallel
Strand 6
B
303 312anti-parallel
Strand 7
B
271 276anti-parallel
Strand 8
B
348 349parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 250first strand
Strand 2
B
374 376anti-parallel
Strand 3
B
353 354parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
130 132first strand
Strand 2
C
208 214anti-parallel
Strand 3
C
175 184parallel
Strand 4
C
142 149parallel
Strand 5
C
240 245parallel
Strand 6
C
303 312anti-parallel
Strand 7
C
271 276anti-parallel
Strand 8
C
348 349parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
248 250first strand
Strand 2
C
374 376anti-parallel
Strand 3
C
353 354parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
130 132first strand
Strand 2
D
208 214anti-parallel
Strand 3
D
176 184parallel
Strand 4
D
144 149parallel
Strand 5
D
240 245parallel
Strand 6
D
303 312anti-parallel
Strand 7
D
271 276anti-parallel
Strand 8
D
348 349parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
248 250first strand
Strand 2
D
374 376anti-parallel
Strand 3
D
353 354parallel
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