Analysis of interatomic Contacts of Structural Units in PDB entry:
6WMR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WMR entry

There are 12 chains in PDB entry 6WMR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	T 35	T 1
H	A 12	A 35
X	T 15	C 25
J	G 3	A 13
S	MET 2	ARG 210
M	MET 1	LYS 201
Z	LEU 80	LEU 577
A	LEU 8	PRO 230
B	LEU 3	GLY 232
C	MET 1	GLU 1356
D	SER 12	GLU 1365
E	MET 1	GLY 72

There are141 helices in PDB entry 6WMR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	S	12	25	Right-handed alpha
Helix 2	AA2	S	38	46	Right-handed alpha
Helix 3	AA3	S	66	75	Right-handed alpha
Helix 4	AA4	S	84	101	Right-handed alpha
Helix 5	AA5	S	102	112	Right-handed alpha
Helix 6	AA6	S	115	135	Right-handed alpha
Helix 7	AA7	S	149	164	Right-handed alpha
Helix 8	AA8	S	182	186	Right-handed 310
Helix 9	AA9	S	203	209	Right-handed alpha
Helix 10	AB1	M	9	23	Right-handed alpha
Helix 11	AB2	M	33	35	Right-handed 310
Helix 12	AB3	M	36	47	Right-handed alpha
Helix 13	AB4	M	64	76	Right-handed alpha
Helix 14	AB5	M	85	111	Right-handed alpha
Helix 15	AB6	M	116	148	Right-handed alpha
Helix 16	AB7	M	156	171	Right-handed alpha
Helix 17	AB8	M	180	192	Right-handed alpha
Helix 18	AB9	M	193	201	Right-handed alpha
Helix 19	AC1	Z	86	96	Right-handed alpha
Helix 20	AC2	Z	102	125	Right-handed alpha
Helix 21	AC3	Z	128	150	Right-handed alpha
Helix 22	AC4	Z	194	213	Right-handed alpha
Helix 23	AC5	Z	216	229	Right-handed alpha
Helix 24	AC6	Z	233	262	Right-handed alpha
Helix 25	AC7	Z	271	276	Right-handed alpha
Helix 26	AC8	Z	285	290	Right-handed 310
Helix 27	AC9	Z	294	316	Right-handed alpha
Helix 28	AD1	Z	318	321	Right-handed 310
Helix 29	AD2	Z	322	345	Right-handed alpha
Helix 30	AD3	Z	347	355	Right-handed alpha
Helix 31	AD4	Z	364	381	Right-handed alpha
Helix 32	AD5	Z	390	411	Right-handed alpha
Helix 33	AD6	Z	417	439	Right-handed alpha
Helix 34	AD7	Z	443	450	Right-handed alpha
Helix 35	AD8	Z	458	463	Right-handed alpha
Helix 36	AD9	Z	483	487	Right-handed 310
Helix 37	AE1	Z	502	507	Right-handed alpha
Helix 38	AE2	Z	508	513	Right-handed alpha
Helix 39	AE3	Z	514	516	Right-handed 310
Helix 40	AE4	Z	519	530	Right-handed alpha
Helix 41	AE5	Z	538	546	Right-handed alpha
Helix 42	AE6	Z	551	565	Right-handed alpha
Helix 43	AE7	Z	572	577	Right-handed 310
Helix 44	AE8	A	36	49	Right-handed alpha
Helix 45	AE9	A	78	88	Right-handed alpha
Helix 46	AF1	A	115	117	Right-handed 310
Helix 47	AF2	A	205	222	Right-handed alpha
Helix 48	AF3	B	32	48	Right-handed alpha
Helix 49	AF4	B	76	85	Right-handed alpha
Helix 50	AF5	B	204	219	Right-handed alpha
Helix 51	AF6	B	227	231	Right-handed 310
Helix 52	AF7	C	28	40	Right-handed alpha
Helix 53	AF8	C	50	58	Right-handed alpha
Helix 54	AF9	C	84	91	Right-handed alpha
Helix 55	AG1	C	206	212	Right-handed alpha
Helix 56	AG2	C	347	354	Right-handed alpha
Helix 57	AG3	C	360	373	Right-handed alpha
Helix 58	AG4	C	382	391	Right-handed alpha
Helix 59	AG5	C	402	412	Right-handed alpha
Helix 60	AG6	C	424	441	Right-handed alpha
Helix 61	AG7	C	450	452	Right-handed 310
Helix 62	AG8	C	458	479	Right-handed alpha
Helix 63	AG9	C	498	512	Right-handed alpha
Helix 64	AH1	C	522	531	Right-handed alpha
Helix 65	AH2	C	554	558	Right-handed 310
Helix 66	AH3	C	612	616	Right-handed 310
Helix 67	AH4	C	651	653	Right-handed 310
Helix 68	AH5	C	673	677	Right-handed 310
Helix 69	AH6	C	679	689	Right-handed alpha
Helix 70	AH7	C	707	712	Right-handed alpha
Helix 71	AH8	C	713	715	Right-handed 310
Helix 72	AH9	C	741	744	Right-handed 310
Helix 73	AI1	C	822	827	Right-handed alpha
Helix 74	AI2	C	898	908	Right-handed alpha
Helix 75	AI3	C	944	980	Right-handed alpha
Helix 76	AI4	C	1030	1046	Right-handed alpha
Helix 77	AI5	C	1095	1099	Right-handed 310
Helix 78	AI6	C	1115	1120	Right-handed alpha
Helix 79	AI7	C	1123	1147	Right-handed alpha
Helix 80	AI8	C	1152	1165	Right-handed alpha
Helix 81	AI9	C	1172	1176	Right-handed 310
Helix 82	AJ1	C	1179	1188	Right-handed alpha
Helix 83	AJ2	C	1203	1215	Right-handed alpha
Helix 84	AJ3	C	1284	1293	Right-handed alpha
Helix 85	AJ4	C	1295	1301	Right-handed alpha
Helix 86	AJ5	C	1309	1323	Right-handed alpha
Helix 87	AJ6	C	1333	1344	Right-handed alpha
Helix 88	AJ7	D	24	32	Right-handed alpha
Helix 89	AJ8	D	92	96	Right-handed 310
Helix 90	AJ9	D	120	127	Right-handed alpha
Helix 91	AK1	D	129	138	Right-handed alpha
Helix 92	AK2	D	159	171	Right-handed alpha
Helix 93	AK3	D	179	189	Right-handed alpha
Helix 94	AK4	D	195	205	Right-handed alpha
Helix 95	AK5	D	215	229	Right-handed alpha
Helix 96	AK6	D	231	234	Right-handed 310
Helix 97	AK7	D	244	248	Right-handed 310
Helix 98	AK8	D	261	284	Right-handed alpha
Helix 99	AK9	D	286	307	Right-handed alpha
Helix 100	AL1	D	325	329	Right-handed 310
Helix 101	AL2	D	335	340	Right-handed alpha
Helix 102	AL3	D	368	375	Right-handed alpha
Helix 103	AL4	D	375	387	Right-handed alpha
Helix 104	AL5	D	391	400	Right-handed alpha
Helix 105	AL6	D	403	414	Right-handed alpha
Helix 106	AL7	D	428	430	Right-handed 310
Helix 107	AL8	D	448	452	Right-handed 310
Helix 108	AL9	D	473	482	Right-handed alpha
Helix 109	AM1	D	483	487	Right-handed 310
Helix 110	AM2	D	503	512	Right-handed alpha
Helix 111	AM3	D	527	537	Right-handed alpha
Helix 112	AM4	D	572	577	Right-handed alpha
Helix 113	AM5	D	586	590	Right-handed 310
Helix 114	AM6	D	595	611	Right-handed alpha
Helix 115	AM7	D	612	630	Right-handed alpha
Helix 116	AM8	D	647	668	Right-handed alpha
Helix 117	AM9	D	673	700	Right-handed alpha
Helix 118	AN1	D	717	725	Right-handed alpha
Helix 119	AN2	D	730	739	Right-handed alpha
Helix 120	AN3	D	765	785	Right-handed alpha
Helix 121	AN4	D	788	802	Right-handed alpha
Helix 122	AN5	D	831	836	Right-handed alpha
Helix 123	AN6	D	865	870	Right-handed alpha
Helix 124	AN7	D	880	884	Right-handed 310
Helix 125	AN8	D	910	918	Right-handed alpha
Helix 126	AN9	D	921	925	Right-handed 310
Helix 127	AO1	D	1125	1133	Right-handed alpha
Helix 128	AO2	D	1207	1212	Right-handed alpha
Helix 129	AO3	D	1212	1231	Right-handed alpha
Helix 130	AO4	D	1237	1246	Right-handed alpha
Helix 131	AO5	D	1247	1249	Right-handed 310
Helix 132	AO6	D	1268	1282	Right-handed alpha
Helix 133	AO7	D	1296	1303	Right-handed alpha
Helix 134	AO8	D	1306	1314	Right-handed alpha
Helix 135	AO9	D	1315	1326	Right-handed alpha
Helix 136	AP1	D	1347	1357	Right-handed alpha
Helix 137	AP2	D	1357	1365	Right-handed alpha
Helix 138	AP3	E	5	10	Right-handed alpha
Helix 139	AP4	E	17	33	Right-handed alpha
Helix 140	AP5	E	46	57	Right-handed alpha
Helix 141	AP6	E	62	67	Right-handed alpha

There are 35 sheets in PDB entry 6WMR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	5	8	first strand
Strand 2	S	30	33	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	27	29	first strand
Strand 2	M	2	4	parallel
Strand 3	M	54	56	anti-parallel
Strand 4	M	61	62	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	470	471	first strand
Strand 2	D	257	260	parallel
Strand 3	D	252	253	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	15	first strand
Strand 2	A	24	29	anti-parallel
Strand 3	A	192	200	anti-parallel
Strand 4	A	178	187	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	106	first strand
Strand 2	A	141	150	anti-parallel
Strand 3	A	54	62	anti-parallel
Strand 4	A	169	170	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	113	first strand
Strand 2	A	131	134	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	18	first strand
Strand 2	B	21	29	anti-parallel
Strand 3	B	190	198	anti-parallel
Strand 4	B	178	182	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	101	first strand
Strand 2	B	142	148	anti-parallel
Strand 3	B	51	58	anti-parallel
Strand 4	B	163	164	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	112	first strand
Strand 2	B	129	132	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1194	1195	parallel
Strand 3	C	703	704	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	78	first strand
Strand 2	C	97	104	anti-parallel
Strand 3	C	124	132	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	142	first strand
Strand 2	C	147	149	anti-parallel
Strand 3	C	516	517	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	454	457	first strand
Strand 2	C	152	156	anti-parallel
Strand 3	C	533	534	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	176	first strand
Strand 2	C	184	185	anti-parallel
Strand 3	C	195	198	anti-parallel
Strand 4	C	204	205	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	601	609	first strand
Strand 2	C	592	598	anti-parallel
Strand 3	C	655	656	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	636	640	first strand
Strand 2	C	645	649	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	751	754	first strand
Strand 2	C	734	739	anti-parallel
Strand 3	C	725	731	anti-parallel
Strand 4	C	778	779	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	791	792	first strand
Strand 2	C	795	796	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1110	1112	first strand
Strand 2	C	804	806	parallel
Strand 3	C	1237	1240	anti-parallel
Strand 4	C	1221	1222	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	818	820	first strand
Strand 2	C	1087	1093	parallel
Strand 3	C	1079	1082	anti-parallel
Strand 4	C	1244	1246	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	848	849	first strand
Strand 2	C	831	845	anti-parallel
Strand 3	C	1060	1073	anti-parallel
Strand 4	C	929	936	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	884	886	first strand
Strand 2	C	920	921	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	890	891	first strand
Strand 2	C	915	916	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1101	1102	first strand
Strand 2	C	1224	1225	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1257	1258	first strand
Strand 2	D	348	354	anti-parallel
Strand 3	D	463	467	anti-parallel
Strand 4	D	419	422	anti-parallel
Strand 5	D	432	440	anti-parallel
Strand 6	D	363	367	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1257	1258	first strand
Strand 2	D	348	354	anti-parallel
Strand 3	D	445	446	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1350	1352	first strand
Strand 2	D	17	19	anti-parallel
Strand 3	D	1329	1331	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	110	first strand
Strand 2	D	236	240	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	143	first strand
Strand 2	D	157	158	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	525	first strand
Strand 2	D	545	555	parallel
Strand 3	D	561	571	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	701	706	first strand
Strand 2	D	709	714	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	806	808	first strand
Strand 2	D	890	891	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	817	819	first strand
Strand 2	D	876	878	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	845	846	first strand
Strand 2	D	852	854	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1265	1267	first strand
Strand 2	D	1251	1254	anti-parallel
Strand 3	D	1290	1293	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WMR

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WMR