Analysis of interatomic Contacts of Structural Units in PDB entry:
6WMT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WMT entry

There are 14 chains in PDB entry 6WMT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	VAL 4	GLY 72
A	LEU 8	PRO 230
B	LEU 3	GLY 232
C	MET 1	GLU 1356
D	SER 12	GLU 1365
G	A 1	T 52
H	T 1	T 42
J	G 3	A 13
K	UNK 250	UNK 322
L	UNK 250	UNK 322
M	MET 1	LYS 201
S	MET 2	ARG 210
X	T 15	C 25
Z	LEU 80	LEU 577

There are148 helices in PDB entry 6WMT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	6	13	Right-handed alpha
Helix 2	AA2	E	17	33	Right-handed alpha
Helix 3	AA3	E	46	58	Right-handed alpha
Helix 4	AA4	E	61	72	Right-handed alpha
Helix 5	AA5	A	36	52	Right-handed alpha
Helix 6	AA6	A	78	89	Right-handed alpha
Helix 7	AA7	A	113	117	Right-handed 310
Helix 8	AA8	A	205	227	Right-handed alpha
Helix 9	AA9	B	32	48	Right-handed alpha
Helix 10	AB1	B	76	87	Right-handed alpha
Helix 11	AB2	B	204	220	Right-handed alpha
Helix 12	AB3	B	225	231	Right-handed alpha
Helix 13	AB4	C	4	10	Right-handed alpha
Helix 14	AB5	C	28	40	Right-handed alpha
Helix 15	AB6	C	50	60	Right-handed alpha
Helix 16	AB7	C	84	92	Right-handed alpha
Helix 17	AB8	C	206	214	Right-handed alpha
Helix 18	AB9	C	347	356	Right-handed alpha
Helix 19	AC1	C	360	373	Right-handed alpha
Helix 20	AC2	C	381	393	Right-handed alpha
Helix 21	AC3	C	402	412	Right-handed alpha
Helix 22	AC4	C	424	441	Right-handed alpha
Helix 23	AC5	C	458	482	Right-handed alpha
Helix 24	AC6	C	498	512	Right-handed alpha
Helix 25	AC7	C	522	532	Right-handed alpha
Helix 26	AC8	C	556	561	Right-handed alpha
Helix 27	AC9	C	610	617	Right-handed alpha
Helix 28	AD1	C	659	663	Right-handed 310
Helix 29	AD2	C	665	671	Right-handed alpha
Helix 30	AD3	C	678	691	Right-handed alpha
Helix 31	AD4	C	706	715	Right-handed alpha
Helix 32	AD5	C	822	828	Right-handed alpha
Helix 33	AD6	C	860	866	Right-handed alpha
Helix 34	AD7	C	898	909	Right-handed alpha
Helix 35	AD8	C	944	980	Right-handed alpha
Helix 36	AD9	C	1024	1028	Right-handed alpha
Helix 37	AE1	C	1030	1048	Right-handed alpha
Helix 38	AE2	C	1115	1120	Right-handed alpha
Helix 39	AE3	C	1122	1148	Right-handed alpha
Helix 40	AE4	C	1151	1165	Right-handed alpha
Helix 41	AE5	C	1172	1176	Right-handed 310
Helix 42	AE6	C	1177	1188	Right-handed alpha
Helix 43	AE7	C	1203	1215	Right-handed alpha
Helix 44	AE8	C	1283	1294	Right-handed alpha
Helix 45	AE9	C	1295	1305	Right-handed alpha
Helix 46	AF1	C	1309	1323	Right-handed alpha
Helix 47	AF2	C	1332	1345	Right-handed alpha
Helix 48	AF3	D	24	31	Right-handed alpha
Helix 49	AF4	D	56	61	Right-handed alpha
Helix 50	AF5	D	94	99	Right-handed alpha
Helix 51	AF6	D	111	116	Right-handed alpha
Helix 52	AF7	D	120	127	Right-handed alpha
Helix 53	AF8	D	129	138	Right-handed alpha
Helix 54	AF9	D	159	171	Right-handed alpha
Helix 55	AG1	D	179	189	Right-handed alpha
Helix 56	AG2	D	191	205	Right-handed alpha
Helix 57	AG3	D	210	229	Right-handed alpha
Helix 58	AG4	D	231	234	Right-handed 310
Helix 59	AG5	D	244	248	Right-handed 310
Helix 60	AG6	D	261	284	Right-handed alpha
Helix 61	AG7	D	286	306	Right-handed alpha
Helix 62	AG8	D	324	330	Right-handed alpha
Helix 63	AG9	D	334	339	Right-handed alpha
Helix 64	AH1	D	368	375	Right-handed alpha
Helix 65	AH2	D	375	387	Right-handed alpha
Helix 66	AH3	D	391	401	Right-handed alpha
Helix 67	AH4	D	403	414	Right-handed alpha
Helix 68	AH5	D	428	432	Right-handed 310
Helix 69	AH6	D	448	456	Right-handed alpha
Helix 70	AH7	D	471	483	Right-handed alpha
Helix 71	AH8	D	502	513	Right-handed alpha
Helix 72	AH9	D	527	538	Right-handed alpha
Helix 73	AI1	D	572	579	Right-handed alpha
Helix 74	AI2	D	595	610	Right-handed alpha
Helix 75	AI3	D	611	634	Right-handed alpha
Helix 76	AI4	D	638	642	Right-handed 310
Helix 77	AI5	D	647	668	Right-handed alpha
Helix 78	AI6	D	672	700	Right-handed alpha
Helix 79	AI7	D	717	726	Right-handed alpha
Helix 80	AI8	D	730	739	Right-handed alpha
Helix 81	AI9	D	765	802	Right-handed alpha
Helix 82	AJ1	D	831	837	Right-handed alpha
Helix 83	AJ2	D	861	872	Right-handed alpha
Helix 84	AJ3	D	892	896	Right-handed alpha
Helix 85	AJ4	D	910	924	Right-handed alpha
Helix 86	AJ5	D	1125	1134	Right-handed alpha
Helix 87	AJ6	D	1204	1212	Right-handed alpha
Helix 88	AJ7	D	1212	1232	Right-handed alpha
Helix 89	AJ8	D	1237	1249	Right-handed alpha
Helix 90	AJ9	D	1268	1281	Right-handed alpha
Helix 91	AK1	D	1296	1303	Right-handed alpha
Helix 92	AK2	D	1306	1314	Right-handed alpha
Helix 93	AK3	D	1315	1327	Right-handed alpha
Helix 94	AK4	D	1334	1342	Right-handed alpha
Helix 95	AK5	D	1348	1365	Right-handed alpha
Helix 96	AK6	K	251	255	Right-handed alpha
Helix 97	AK7	K	256	261	Right-handed 310
Helix 98	AK8	K	263	274	Right-handed alpha
Helix 99	AK9	K	277	284	Right-handed alpha
Helix 100	AL1	K	285	292	Right-handed alpha
Helix 101	AL2	K	296	311	Right-handed alpha
Helix 102	AL3	L	251	255	Right-handed alpha
Helix 103	AL4	L	256	261	Right-handed 310
Helix 104	AL5	L	263	274	Right-handed alpha
Helix 105	AL6	L	277	284	Right-handed alpha
Helix 106	AL7	L	285	292	Right-handed alpha
Helix 107	AL8	L	296	311	Right-handed alpha
Helix 108	AL9	M	9	23	Right-handed alpha
Helix 109	AM1	M	33	35	Right-handed 310
Helix 110	AM2	M	36	47	Right-handed alpha
Helix 111	AM3	M	64	76	Right-handed alpha
Helix 112	AM4	M	85	112	Right-handed alpha
Helix 113	AM5	M	116	149	Right-handed alpha
Helix 114	AM6	M	156	173	Right-handed alpha
Helix 115	AM7	M	180	192	Right-handed alpha
Helix 116	AM8	M	193	201	Right-handed alpha
Helix 117	AM9	S	12	26	Right-handed alpha
Helix 118	AN1	S	38	46	Right-handed alpha
Helix 119	AN2	S	63	75	Right-handed alpha
Helix 120	AN3	S	84	101	Right-handed alpha
Helix 121	AN4	S	102	112	Right-handed alpha
Helix 122	AN5	S	115	135	Right-handed alpha
Helix 123	AN6	S	149	165	Right-handed alpha
Helix 124	AN7	S	176	186	Right-handed alpha
Helix 125	AN8	S	203	210	Right-handed alpha
Helix 126	AN9	Z	86	96	Right-handed alpha
Helix 127	AO1	Z	102	126	Right-handed alpha
Helix 128	AO2	Z	127	151	Right-handed alpha
Helix 129	AO3	Z	194	213	Right-handed alpha
Helix 130	AO4	Z	216	229	Right-handed alpha
Helix 131	AO5	Z	233	265	Right-handed alpha
Helix 132	AO6	Z	271	277	Right-handed alpha
Helix 133	AO7	Z	283	290	Right-handed alpha
Helix 134	AO8	Z	294	316	Right-handed alpha
Helix 135	AO9	Z	318	347	Right-handed alpha
Helix 136	AP1	Z	348	356	Right-handed alpha
Helix 137	AP2	Z	364	383	Right-handed alpha
Helix 138	AP3	Z	391	411	Right-handed alpha
Helix 139	AP4	Z	417	439	Right-handed alpha
Helix 140	AP5	Z	443	450	Right-handed alpha
Helix 141	AP6	Z	456	463	Right-handed alpha
Helix 142	AP7	Z	478	482	Right-handed 310
Helix 143	AP8	Z	483	488	Right-handed alpha
Helix 144	AP9	Z	495	516	Right-handed alpha
Helix 145	AQ1	Z	519	530	Right-handed alpha
Helix 146	AQ2	Z	538	547	Right-handed alpha
Helix 147	AQ3	Z	551	565	Right-handed alpha
Helix 148	AQ4	Z	566	575	Right-handed alpha

There are 39 sheets in PDB entry 6WMT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	20	first strand
Strand 2	A	24	29	anti-parallel
Strand 3	A	192	200	anti-parallel
Strand 4	A	178	187	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	106	first strand
Strand 2	A	141	150	anti-parallel
Strand 3	A	54	62	anti-parallel
Strand 4	A	169	170	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	92	first strand
Strand 2	A	124	125	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	16	first strand
Strand 2	B	21	27	anti-parallel
Strand 3	B	191	199	anti-parallel
Strand 4	B	172	174	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	16	first strand
Strand 2	B	21	27	anti-parallel
Strand 3	B	191	199	anti-parallel
Strand 4	B	178	181	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	118	first strand
Strand 2	B	97	101	anti-parallel
Strand 3	B	142	149	anti-parallel
Strand 4	B	50	58	anti-parallel
Strand 5	B	163	164	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	91	first strand
Strand 2	B	122	123	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	112	first strand
Strand 2	B	129	132	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1194	1195	parallel
Strand 3	C	703	704	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	78	first strand
Strand 2	C	96	104	anti-parallel
Strand 3	C	125	133	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	143	first strand
Strand 2	C	146	150	anti-parallel
Strand 3	C	515	517	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	156	first strand
Strand 2	C	454	457	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	164	first strand
Strand 2	C	172	176	anti-parallel
Strand 3	C	184	188	anti-parallel
Strand 4	C	194	198	anti-parallel
Strand 5	C	204	205	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	583	584	first strand
Strand 2	C	590	598	anti-parallel
Strand 3	C	601	609	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	583	584	first strand
Strand 2	C	590	598	anti-parallel
Strand 3	C	655	657	anti-parallel
Strand 4	C	619	620	parallel
Strand 5	C	636	640	anti-parallel
Strand 6	C	645	649	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	719	720	first strand
Strand 2	C	784	787	anti-parallel
Strand 3	C	770	771	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	750	754	first strand
Strand 2	C	734	739	anti-parallel
Strand 3	C	725	731	anti-parallel
Strand 4	C	778	779	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	791	792	first strand
Strand 2	C	795	796	anti-parallel

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There are 9 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	799	800	first strand
Strand 2	C	1244	1246	anti-parallel
Strand 3	C	1079	1082	anti-parallel
Strand 4	C	1087	1093	anti-parallel
Strand 5	C	818	820	parallel
Strand 6	C	1110	1111	anti-parallel
Strand 7	C	804	805	parallel
Strand 8	C	1237	1240	anti-parallel
Strand 9	C	1221	1222	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	831	843	first strand
Strand 2	C	1060	1073	anti-parallel
Strand 3	C	928	936	anti-parallel
Strand 4	C	878	879	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	884	886	first strand
Strand 2	C	920	921	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	889	891	first strand
Strand 2	C	915	917	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1101	1102	first strand
Strand 2	C	1224	1225	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1347	1352	first strand
Strand 2	D	17	22	anti-parallel
Strand 3	D	1329	1330	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	35	first strand
Strand 2	D	100	110	parallel
Strand 3	D	236	242	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	143	first strand
Strand 2	D	157	158	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	252	253	first strand
Strand 2	D	257	258	anti-parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	348	354	first strand
Strand 2	D	445	446	parallel
Strand 3	D	363	367	anti-parallel
Strand 4	D	433	440	parallel
Strand 5	D	419	422	anti-parallel
Strand 6	D	463	467	anti-parallel
Strand 7	D	348	354	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	525	first strand
Strand 2	D	545	549	parallel
Strand 3	D	567	571	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	552	555	first strand
Strand 2	D	561	564	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	701	704	first strand
Strand 2	D	711	714	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	806	808	first strand
Strand 2	D	890	891	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	817	820	first strand
Strand 2	D	875	878	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	840	841	first strand
Strand 2	D	858	859	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	845	846	first strand
Strand 2	D	852	854	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1143	1144	first strand
Strand 2	D	1196	1197	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1265	1267	first strand
Strand 2	D	1251	1257	anti-parallel
Strand 3	D	1288	1292	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	29	30	first strand
Strand 2	M	2	5	parallel
Strand 3	M	54	56	anti-parallel
Strand 4	M	61	62	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	5	8	first strand
Strand 2	S	30	33	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WMT

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WMT